biolink-model

Schema and generated objects for biolink data model and upper ontology

This project is maintained by biolink

Build Status

Biolink Model

A high level datamodel of biological entities (genes, diseases, phenotypes, pathways, individuals, substances, etc) and their associations.

Datamodel

The datamodel consists of classes that represent nodes and edges, in a property graph sense.

Nodes

Edges

Slots

See the Datamodel index for a list nodes, edges, and slots.

Identifiers

See biolink json-ld context to see CURIE prefix mappings.

BioLink model representation

Neo4J representation

See mapping to neo4j

RDF representation

See mapping to RDF