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Class: Dataset

Description: an item that refers to a collection of data from a data source.
classDiagram class Dataset InformationContentEntity <|-- Dataset Dataset : category Dataset : creation_date Dataset : deprecated Dataset : description Dataset : format Dataset : full_name Dataset : has_attribute Dataset --|> Attribute : has_attribute Dataset : id Dataset : iri Dataset : license Dataset : name Dataset : provided_by Dataset : rights Dataset : synonym Dataset : type Dataset : xref

Inheritance

Slots

Name Cardinality and Range Inheritance Examples
license:
None
0..1
String
InformationContentEntity
rights:
None
0..1
String
InformationContentEntity
format:
None
0..1
String
InformationContentEntity
creation_date:
date on which an entity was created. This can be applied to nodes or edges
0..1
Date
InformationContentEntity
provided_by:
The value in this node property represents the knowledge provider that created or assembled the node and all of its attributes. Used internally to represent how a particular node made its way into a knowledge provider or graph.
0..*
String
NamedThing
xref:
A database cross reference or alternative identifier for a NamedThing or edge between two NamedThings. This property should point to a database record or webpage that supports the existence of the edge, or gives more detail about the edge. This property can be used on a node or edge to provide multiple URIs or CURIE cross references.
0..*
Uriorcurie
NamedThing
full_name:
a long-form human readable name for a thing
0..1
LabelType
NamedThing
synonym:
Alternate human-readable names for a thing
0..*
LabelType
NamedThing
id:
A unique identifier for an entity. Must be either a CURIE shorthand for a URI or a complete URI
1..1
String
Entity
iri:
An IRI for an entity. This is determined by the id using expansion rules.
0..1
IriType
Entity
category:
Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the biolink entity type class. In a neo4j database this MAY correspond to the neo4j label tag. In an RDF database it should be a biolink model class URI. This field is multi-valued. It should include values for ancestors of the biolink class; for example, a protein such as Shh would have category values biolink:Protein, biolink:GeneProduct, biolink:MolecularEntity. In an RDF database, nodes will typically have an rdf:type triples. This can be to the most specific biolink class, or potentially to a class more specific than something in biolink. For example, a sequence feature f may have a rdf:type assertion to a SO class such as TF_binding_site, which is more specific than anything in biolink. Here we would have categories {biolink:GenomicEntity, biolink:MolecularEntity, biolink:NamedThing}
1..*
Uriorcurie
Entity
type:
None
0..*
String
Entity
name:
A human-readable name for an attribute or entity.
0..1
LabelType
Entity
description:
a human-readable description of an entity
0..1
NarrativeText
Entity
has_attribute:
connects any entity to an attribute
0..*
Attribute
Entity
deprecated:
A boolean flag indicating that an entity is no longer considered current or valid.
0..1
Boolean
Entity

Usages

used by used in type used
DatasetVersion has_dataset range Dataset

LinkML Source

name: dataset
description: an item that refers to a collection of data from a data source.
from_schema: https://w3id.org/biolink/biolink-model
exact_mappings:
- IAO:0000100
- dctypes:Dataset
- schema:dataset
- dcid:Dataset
is_a: information content entity