Slot: predicate
Description: Has a value from the Biolink 'related_to' hierarchy. In RDF, this corresponds to rdf:predicate and in Neo4j this corresponds to the relationship type. The convention is for an edge label in snake_case form. For example, biolink:related_to, biolink:causes, biolink:treats
Required: True
Required: True
Domain: Association
Range: Uriorcurie
Inheritance
- association_slot
- predicate
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| ChemicalEntityToChemicalEntityAssociation | A relationship between two chemical entities. This can encompass actual interactions as well as temporal causal edges, e.g. one chemical converted to another. | no |
| EntityToDiseaseOrPhenotypicFeatureAssociationMixin | None | no |
| CellLineToEntityAssociationMixin | An relationship between a cell line and another entity | no |
| CaseToGeneAssociation | Association between a Case and a Gene (e.g., indicating a gene of interest for the case) | no |
| FrequencyQualifierMixin | Qualifier for frequency type associations | no |
| NamedThingAssociatedWithLikelihoodOfNamedThingAssociation | An association in which the subject entity is linked to the likelihood of the object entity occurring, manifesting, or being observed. Subject and object may each be qualified by aspect and context, and the association may be further qualified by a population context. | yes |
| EntityToPhenotypicFeatureAssociationMixin | A mixin applied to any association whose object (target node) is a phenotypic feature. | no |
| PredicateMapping | A deprecated predicate mapping object contains the deprecated predicate and an example of the rewiring that should be done to use a qualified statement in its place. | no |
| GenotypeToEntityAssociationMixin | None | no |
| VariantToEntityAssociationMixin | None | no |
| CaseToEntityAssociationMixin | An abstract association for use where the case is the subject | no |
| MaterialSampleToEntityAssociationMixin | An association between a material sample and something. | no |
| CaseToVariantAssociation | Association between a Case and a Genetic Variant | no |
| DiseaseToEntityAssociationMixin | A mixin applied to any association whose subject (source node) is a disease. | no |
| OrganismTaxonToEntityAssociation | An association between an organism taxon and another entity | no |
| EntityToOutcomeAssociationMixin | An association between some entity and an outcome | no |
| ChemicalEntityToEntityAssociationMixin | An interaction between a chemical entity and another entity | no |
| Association | A typed association between two entities, supported by evidence | no |
| MaterialSampleDerivationAssociation | An association between a material sample and the material entity from which it is derived. | yes |
| DrugToEntityAssociationMixin | An interaction between a drug and another entity | no |
| DiseaseOrPhenotypicFeatureToEntityAssociationMixin | None | no |
| GeneToEntityAssociationMixin | None | no |
| ModelToDiseaseAssociationMixin | This mixin is used for any association class for which the subject (source node) plays the role of a 'model', in that it recapitulates some features of the disease in a way that is useful for studying the disease outside a patient carrying the disease | yes |
| EntityToExposureEventAssociationMixin | An association between some entity and an exposure event. | no |
| MacromolecularMachineToEntityAssociationMixin | an association which has a macromolecular machine mixin as a subject | no |
| CaseToDiseaseAssociation | An association between a Case (patient) and a Disease | no |
| ChemicalToEntityAssociationMixin | An interaction between a chemical entity and another entity | no |
| GeneToGeneAssociation | parent class for different kinds of gene-gene or gene product to gene product relationships. Includes homology and interaction. | no |
LinkML Source
name: predicate
local_names:
ga4gh:
local_name_source: ga4gh
local_name_value: annotation predicate
translator:
local_name_source: translator
local_name_value: predicate
description: Has a value from the Biolink 'related_to' hierarchy. In RDF, this corresponds
to rdf:predicate and in Neo4j this corresponds to the relationship type. The convention
is for an edge label in snake_case form. For example, biolink:related_to, biolink:causes,
biolink:treats
from_schema: https://w3id.org/biolink/vocab/
exact_mappings:
- owl:annotatedProperty
- OBAN:association_has_predicate
is_a: association slot
domain: association
slot_uri: rdf:predicate
alias: predicate
domain_of:
- predicate mapping
- association
- gene to gene association
- cell line to entity association mixin
- chemical entity to entity association mixin
- drug to entity association mixin
- chemical to entity association mixin
- case to entity association mixin
- chemical entity to chemical entity association
- named thing associated with likelihood of named thing association
- material sample to entity association mixin
- material sample derivation association
- disease to entity association mixin
- entity to exposure event association mixin
- entity to outcome association mixin
- frequency qualifier mixin
- entity to phenotypic feature association mixin
- disease or phenotypic feature to entity association mixin
- entity to disease or phenotypic feature association mixin
- genotype to entity association mixin
- case to disease association
- case to variant association
- case to gene association
- gene to entity association mixin
- variant to entity association mixin
- model to disease association mixin
- macromolecular machine to entity association mixin
- organism taxon to entity association
range: uriorcurie
required: true