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Slot: object_direction_qualifier

Description: Composes with the core concept (+ aspect if provided) to describe a change in its direction or degree. This qualifier qualifies the object of an association (aka: statement).

Domain: Association
Range: DirectionQualifierEnum

Inheritance

Applicable Classes

Name Description Modifies Slot
PredicateMapping A deprecated predicate mapping object contains the deprecated predicate and an example of the rewiring that should be done to use a qualified statement in its place. no
ChemicalEntityToBiologicalProcessAssociation An association between a chemical entity and a biological process, where the chemical entity has some effect on the biological process. no
ChemicalEntityOrGeneOrGeneProductRegulatesGeneAssociation A regulatory relationship between two genes yes
ChemicalGeneInteractionAssociation describes an interaction between a chemical entity and a gene or gene product. Any biological or chemical effect resulting from such an interaction are out of scope, and covered by the ChemicalAffectsGeneAssociation type (e.g. impact of a chemical on the abundance, activity, structure, etc, of either participant in the interaction) yes
GeneRegulatesGeneAssociation Describes a regulatory relationship between two genes or gene products. yes
ChemicalAffectsBiologicalEntityAssociation Describes an effect that a chemical has on a biological entity (e.g. an impact of on its abundance, activity,localization, processing, expression, etc.) yes
GeneAffectsChemicalAssociation Describes an effect that a gene or gene product has on a chemical entity (e.g. an impact of on its abundance, activity, localization, processing, transport, etc.) yes
FeatureOrDiseaseQualifiersToEntityMixin Qualifiers for disease or phenotype to entity associations. no
EntityToFeatureOrGeneQualifiersMixin Qualifiers for entity to gene associations. no
GeneToPhenotypicFeatureAssociation An association between a gene or gene product and a phenotypic feature, where variation in the gene is correlated with the phenotypic feature. yes
CausalGeneToDiseaseAssociation An association between a gene and a disease where variation in the gene has been shown to have a causal role in the disease. no
EntityToFeatureOrVariantQualifiersMixin Qualifiers for entity to variant associations. no
GeneToDiseaseAssociation An association between a gene or gene product and a disease, where variation in the gene is correlated with the disease. yes
EntityToFeatureOrDiseaseQualifiersMixin Qualifiers for entity to disease or phenotype associations. no
CorrelatedGeneToDiseaseAssociation An association between a gene (or gene product) and a disease for which the gene is statistically correlated with the disease rather than asserted as causal. Such associations typically derive from GWAS, co-occurrence analyses, or other statistical methods, and are annotated with scores such as a z-score or a diseases confidence score. no

Example values

Slot Name Value
object_direction_qualifier increased
object_direction_qualifier downregulated

LinkML Source

name: object direction qualifier
description: 'Composes with the core concept (+ aspect if provided) to describe a
  change in its direction or degree. This qualifier qualifies the object of an association
  (aka: statement).'
examples:
- value: increased
- value: downregulated
in_subset:
- translator_minimal
from_schema: https://w3id.org/biolink/vocab/
is_a: direction qualifier
domain: association
alias: object_direction_qualifier
domain_of:
- predicate mapping
- chemical entity to biological process association
- chemical gene interaction association
- gene regulates gene association
- chemical affects biological entity association
- gene affects chemical association
- entity to feature or disease qualifiers mixin
- entity to feature or variant qualifiers mixin
- entity to feature or gene qualifiers mixin
- feature or disease qualifiers to entity mixin
- gene to phenotypic feature association
- gene to disease association
- causal gene to disease association
- correlated gene to disease association
- chemical entity or gene or gene product regulates gene association
range: DirectionQualifierEnum