Slot: subject_derivative_qualifier
Description: A qualifier that composes with a core subject/object concept to describe something that is derived from the core concept. For example, the qualifier ‘metabolite’ combines with a ‘Chemical X’ core concept to express the composed concept ‘a metabolite of Chemical X’. This qualifier is for the subject of an association (or statement).
Domain: Association
Range: String
Inheritance
- association_slot
- qualifier
- derivative_qualifier
- subject_derivative_qualifier
- derivative_qualifier
- qualifier
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| GeneAffectsChemicalAssociation | Describes an effect that a gene or gene product has on a chemical entity (e.g. an impact of on its abundance, activity, localization, processing, transport, etc.) | no |
| ChemicalGeneSensitivityAssociation | Describes a relationship in which a chemical entity affects the sensitivity or susceptibility of a biological system to a gene or gene product (e.g. a chemical that increases or decreases the response to a gene or gene product). This covers 'response to substance' style interactions from sources such as CTD that map to the 'affects sensitivity to' predicate hierarchy, as opposed to the abundance/activity/processing effects covered by ChemicalAffectsGeneAssociation. | yes |
| ChemicalGeneInteractionAssociation | describes an interaction between a chemical entity and a gene or gene product. Any biological or chemical effect resulting from such an interaction are out of scope, and covered by the ChemicalAffectsGeneAssociation type (e.g. impact of a chemical on the abundance, activity, structure, etc, of either participant in the interaction) | yes |
| PredicateMapping | A deprecated predicate mapping object contains the deprecated predicate and an example of the rewiring that should be done to use a qualified statement in its place. | no |
| ChemicalAffectsBiologicalEntityAssociation | Describes an effect that a chemical has on a biological entity (e.g. an impact of on its abundance, activity,localization, processing, expression, etc.) | yes |
| MacromolecularMachineHasSubstrateAssociation | Describes the relationship between an enzyme (usually a macromolecular complex or gene product) and the molecules it acts on (substrate). The substrate can be a chemical, a polypeptide, or a protein. | no |
Example values
| Slot Name | Value |
|---|---|
| subject_derivative_qualifier | metabolite |
LinkML Source
name: subject derivative qualifier
description: A qualifier that composes with a core subject/object concept to describe
something that is derived from the core concept. For example, the qualifier ‘metabolite’
combines with a ‘Chemical X’ core concept to express the composed concept ‘a metabolite
of Chemical X’. This qualifier is for the subject of an association (or statement).
examples:
- value: metabolite
in_subset:
- translator_minimal
from_schema: https://w3id.org/biolink/vocab/
is_a: derivative qualifier
domain: association
alias: subject_derivative_qualifier
domain_of:
- predicate mapping
- chemical gene interaction association
- macromolecular machine has substrate association
- chemical affects biological entity association
- chemical gene sensitivity association
- gene affects chemical association
range: string