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Class: GenotypeToEntityAssociationMixin

classDiagram class GenotypeToEntityAssociationMixin GenotypeToEntityAssociationMixin <|-- GenotypeToPhenotypicFeatureAssociation GenotypeToEntityAssociationMixin <|-- GenotypeToDiseaseAssociation GenotypeToEntityAssociationMixin : object GenotypeToEntityAssociationMixin --|> NamedThing : object GenotypeToEntityAssociationMixin : predicate GenotypeToEntityAssociationMixin : subject GenotypeToEntityAssociationMixin --|> Genotype : subject

Slots

Name Cardinality and Range Inheritance Examples
subject:
genotype that is the subject of the association 		1
Genotype		 direct
predicate:
Has a value from the Biolink 'related_to' hierarchy. In RDF, this corresponds to rdf:predicate and in Neo4j this corresponds to the relationship type. The convention is for an edge label in snake_case form. For example, biolink:related_to, biolink:causes, biolink:treats 		1
Uriorcurie		 direct
object:
connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object. 		1
NamedThing		 direct

Mixin Usage

mixed into description
GenotypeToPhenotypicFeatureAssociation Any association between one genotype and a phenotypic feature, where having the genotype confers the phenotype, either in isolation or through environment
GenotypeToDiseaseAssociation An association between a genotype and a disease, in which the genotype (typically a combination of alleles at one or more loci) is linked to the disease state.

LinkML Source

name: genotype to entity association mixin
from_schema: https://w3id.org/biolink/vocab/
mixin: true
slots:
- subject
- predicate
- object
slot_usage:
  subject:
    name: subject
    description: genotype that is the subject of the association
    range: genotype
defining_slots:
- subject