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Class: OrganismTaxonToEntityAssociation

Description: An association between an organism taxon and another entity
classDiagram class OrganismTaxonToEntityAssociation OrganismTaxonToEntityAssociation <|-- OrganismTaxonToOrganismTaxonAssociation OrganismTaxonToEntityAssociation <|-- OrganismTaxonToEnvironmentAssociation OrganismTaxonToEntityAssociation : object OrganismTaxonToEntityAssociation --|> NamedThing : object OrganismTaxonToEntityAssociation : predicate OrganismTaxonToEntityAssociation : subject OrganismTaxonToEntityAssociation --|> OrganismTaxon : subject

Slots

Name Cardinality and Range Inheritance Examples
subject:
organism taxon that is the subject of the association
1
OrganismTaxon		 direct
predicate:
Has a value from the Biolink 'related_to' hierarchy. In RDF, this corresponds to rdf:predicate and in Neo4j this corresponds to the relationship type. The convention is for an edge label in snake_case form. For example, biolink:related_to, biolink:causes, biolink:treats 		1
Uriorcurie		 direct
object:
connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object. 		1
NamedThing		 direct

Mixin Usage

mixed into description
OrganismTaxonToOrganismTaxonAssociation A relationship between two organism taxon nodes
OrganismTaxonToEnvironmentAssociation An abstract association between an organism taxon and an environmental context (e.g., a habitat, biome, or ecological setting) in which the taxon occurs.

LinkML Source

name: organism taxon to entity association
description: An association between an organism taxon and another entity
from_schema: https://w3id.org/biolink/vocab/
mixin: true
slots:
- subject
- predicate
- object
slot_usage:
  subject:
    name: subject
    description: organism taxon that is the subject of the association
    range: organism taxon
defining_slots:
- subject