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Class: FrequencyQualifierMixin

Description: Qualifier for frequency type associations
classDiagram class FrequencyQualifierMixin FrequencyQualifierMixin <|-- EntityToFeatureOrDiseaseQualifiersMixin FrequencyQualifierMixin <|-- EntityToFeatureOrVariantQualifiersMixin FrequencyQualifierMixin <|-- EntityToFeatureOrGeneQualifiersMixin FrequencyQualifierMixin <|-- FeatureOrDiseaseQualifiersToEntityMixin FrequencyQualifierMixin <|-- VariantToPopulationAssociation FrequencyQualifierMixin : frequency_qualifier FrequencyQualifierMixin : object FrequencyQualifierMixin --|> NamedThing : object FrequencyQualifierMixin : predicate FrequencyQualifierMixin : subject FrequencyQualifierMixin --|> NamedThing : subject

Inheritance

Slots

Name Cardinality and Range Inheritance Examples
frequency_qualifier:
a qualifier used in a phenotypic association to state how frequent the phenotype is observed in the subject
0..1
FrequencyValue		 direct
subject:
connects an association to the subject of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object. 		1
NamedThing		 direct
predicate:
Has a value from the Biolink 'related_to' hierarchy. In RDF, this corresponds to rdf:predicate and in Neo4j this corresponds to the relationship type. The convention is for an edge label in snake_case form. For example, biolink:related_to, biolink:causes, biolink:treats 		1
Uriorcurie		 direct
object:
connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object. 		1
NamedThing		 direct

Mixin Usage

mixed into description
VariantToPopulationAssociation An association between a variant and a population, where the variant has particular frequency in the population

LinkML Source

name: frequency qualifier mixin
description: Qualifier for frequency type associations
from_schema: https://w3id.org/biolink/vocab/
mixin: true
slots:
- frequency qualifier
- subject
- predicate
- object