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Class: MacromolecularMachineMixin

Description: A union of gene locus, gene product, and macromolecular complex. These are the basic units of function in a cell. They either carry out individual biological activities, or they encode molecules which do this.
classDiagram class MacromolecularMachineMixin MacromolecularMachineMixin <|-- GeneOrGeneProduct MacromolecularMachineMixin <|-- MacromolecularComplex MacromolecularMachineMixin : name

Inheritance

Slots

Name Cardinality and Range Inheritance Examples
name:
genes are typically designated by a short symbol and a full name. We map the symbol to the default display name and use an additional slot for full name
0..1
SymbolType		 direct

Mixin Usage

mixed into description
MacromolecularComplex A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.

Usages

used by used in type used
MolecularActivity enabled_by range MacromolecularMachineMixin
ChemicalToChemicalDerivationAssociation catalyst_qualifier range MacromolecularMachineMixin
FunctionalAssociation subject range MacromolecularMachineMixin
MacromolecularMachineToEntityAssociationMixin subject domain MacromolecularMachineMixin
MacromolecularMachineToMolecularActivityAssociation subject domain MacromolecularMachineMixin
MacromolecularMachineToMolecularActivityAssociation subject range MacromolecularMachineMixin
MacromolecularMachineToBiologicalProcessAssociation subject domain MacromolecularMachineMixin
MacromolecularMachineToBiologicalProcessAssociation subject range MacromolecularMachineMixin
MacromolecularMachineToCellularComponentAssociation subject domain MacromolecularMachineMixin
MacromolecularMachineToCellularComponentAssociation subject range MacromolecularMachineMixin

LinkML Source

name: macromolecular machine mixin
description: A union of gene locus, gene product, and macromolecular complex. These
  are the basic units of function in a cell. They either carry out individual biological
  activities, or they encode molecules which do this.
from_schema: https://w3id.org/biolink/biolink-model
mixin: true
slots:
- name
slot_usage:
  name:
    name: name
    description: genes are typically designated by a short symbol and a full name.
      We map the symbol to the default display name and use an additional slot for
      full name
    domain_of:
    - attribute
    - entity
    - macromolecular machine mixin
    range: symbol type