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Class: NamedThing

Description: a databased entity or concept/class
classDiagram class NamedThing Entity <|-- NamedThing NamedThing <|-- Attribute NamedThing <|-- OrganismTaxon NamedThing <|-- Event NamedThing <|-- AdministrativeEntity NamedThing <|-- InformationContentEntity NamedThing <|-- PhysicalEntity NamedThing <|-- Activity NamedThing <|-- Procedure NamedThing <|-- Phenomenon NamedThing <|-- Device NamedThing <|-- DiagnosticAid NamedThing <|-- PlanetaryEntity NamedThing <|-- BiologicalEntity NamedThing <|-- ChemicalEntity NamedThing <|-- ClinicalEntity NamedThing <|-- Treatment NamedThing : category NamedThing : deprecated NamedThing : description NamedThing : equivalent_identifiers NamedThing : full_name NamedThing : has_attribute NamedThing --|> Attribute : has_attribute NamedThing : id NamedThing : information_content NamedThing : iri NamedThing : name NamedThing : provided_by NamedThing : synonym NamedThing : type NamedThing : xref

Inheritance

Slots

Name Cardinality and Range Inheritance Examples
provided_by:
The value in this node property represents the knowledge provider that created or assembled the node and all of its attributes. Used internally to represent how a particular node made its way into a knowledge provider or graph.
*
String		 direct
xref:
A database cross reference or alternative identifier for a NamedThing or edge between two NamedThings. This property should point to a database record or webpage that supports the existence of the edge, or gives more detail about the edge. This property can be used on a node or edge to provide multiple URIs or CURIE cross references. 		*
Uriorcurie		 direct
full_name:
a long-form human readable name for a thing 		0..1
LabelType		 direct
synonym:
Alternate human-readable names for a thing 		*
LabelType		 direct
information_content:
Information content (IC) value for a term, primarily from Automats. 		0..1
Float		 direct
equivalent_identifiers:
A set of identifiers that are considered equivalent to the primary identifier of the entity. This attribute is used to represent a collection of identifiers that are considered equivalent to the primary identifier of an entity. These equivalent identifiers may come from different databases, ontologies, or naming conventions, but they all refer to the same underlying concept or entity. This attribute is particularly useful in data integration and interoperability scenarios, where it is important to recognize and link different representations of the same entity across various sources. 		*
Uriorcurie		 direct
id:
A unique identifier for an entity. Must be either a CURIE shorthand for a URI or a complete URI 		1
String		 Entity
iri:
An IRI for an entity. This is determined by the id using expansion rules. 		0..1
IriType		 Entity
category:
Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the biolink entity type class. In a neo4j database this MAY correspond to the neo4j label tag. In an RDF database it should be a biolink model class URI. This field is multi-valued. It should include values for ancestors of the biolink class; for example, a protein such as Shh would have category values biolink:Protein, biolink:GeneProduct, biolink:MolecularEntity. In an RDF database, nodes will typically have an rdf:type triples. This can be to the most specific biolink class, or potentially to a class more specific than something in biolink. For example, a sequence feature f may have a rdf:type assertion to a SO class such as TF_binding_site, which is more specific than anything in biolink. Here we would have categories {biolink:GenomicEntity, biolink:MolecularEntity, biolink:NamedThing} 		1..*
Uriorcurie		 Entity
type:
None 		*
String		 Entity
name:
A human-readable name for an attribute or entity. 		0..1
LabelType		 Entity
description:
a human-readable description of an entity 		0..1
NarrativeText		 Entity
has_attribute:
connects any entity to an attribute 		*
Attribute		 Entity
deprecated:
A boolean flag indicating that an entity is no longer considered current or valid. 		0..1
Boolean		 Entity

Usages

used by used in type used
PredicateMapping exact_match domain NamedThing
PredicateMapping exact_match range NamedThing
PredicateMapping narrow_match domain NamedThing
PredicateMapping narrow_match range NamedThing
PredicateMapping broad_match domain NamedThing
PredicateMapping broad_match range NamedThing
Attribute has_qualitative_value range NamedThing
Attribute provided_by domain NamedThing
Attribute xref domain NamedThing
Attribute full_name domain NamedThing
Attribute synonym domain NamedThing
Attribute information_content domain NamedThing
Attribute equivalent_identifiers domain NamedThing
ChemicalRole has_qualitative_value range NamedThing
ChemicalRole provided_by domain NamedThing
ChemicalRole xref domain NamedThing
ChemicalRole full_name domain NamedThing
ChemicalRole synonym domain NamedThing
ChemicalRole information_content domain NamedThing
ChemicalRole equivalent_identifiers domain NamedThing
BiologicalSex has_qualitative_value range NamedThing
BiologicalSex provided_by domain NamedThing
BiologicalSex xref domain NamedThing
BiologicalSex full_name domain NamedThing
BiologicalSex synonym domain NamedThing
BiologicalSex information_content domain NamedThing
BiologicalSex equivalent_identifiers domain NamedThing
PhenotypicSex has_qualitative_value range NamedThing
PhenotypicSex provided_by domain NamedThing
PhenotypicSex xref domain NamedThing
PhenotypicSex full_name domain NamedThing
PhenotypicSex synonym domain NamedThing
PhenotypicSex information_content domain NamedThing
PhenotypicSex equivalent_identifiers domain NamedThing
GenotypicSex has_qualitative_value range NamedThing
GenotypicSex provided_by domain NamedThing
GenotypicSex xref domain NamedThing
GenotypicSex full_name domain NamedThing
GenotypicSex synonym domain NamedThing
GenotypicSex information_content domain NamedThing
GenotypicSex equivalent_identifiers domain NamedThing
SeverityValue has_qualitative_value range NamedThing
SeverityValue provided_by domain NamedThing
SeverityValue xref domain NamedThing
SeverityValue full_name domain NamedThing
SeverityValue synonym domain NamedThing
SeverityValue information_content domain NamedThing
SeverityValue equivalent_identifiers domain NamedThing
FrequencyQuantifier has_count domain NamedThing
FrequencyQuantifier has_total domain NamedThing
FrequencyQuantifier has_quotient domain NamedThing
FrequencyQuantifier has_percentage domain NamedThing
NamedThing provided_by domain NamedThing
NamedThing xref domain NamedThing
NamedThing full_name domain NamedThing
NamedThing synonym domain NamedThing
NamedThing information_content domain NamedThing
NamedThing equivalent_identifiers domain NamedThing
OrganismTaxon has_taxonomic_rank domain NamedThing
OrganismTaxon provided_by domain NamedThing
OrganismTaxon xref domain NamedThing
OrganismTaxon full_name domain NamedThing
OrganismTaxon synonym domain NamedThing
OrganismTaxon information_content domain NamedThing
OrganismTaxon equivalent_identifiers domain NamedThing
Event provided_by domain NamedThing
Event xref domain NamedThing
Event full_name domain NamedThing
Event synonym domain NamedThing
Event information_content domain NamedThing
Event equivalent_identifiers domain NamedThing
AdministrativeEntity provided_by domain NamedThing
AdministrativeEntity xref domain NamedThing
AdministrativeEntity full_name domain NamedThing
AdministrativeEntity synonym domain NamedThing
AdministrativeEntity information_content domain NamedThing
AdministrativeEntity equivalent_identifiers domain NamedThing
StudyResult creation_date domain NamedThing
StudyResult provided_by domain NamedThing
StudyResult xref domain NamedThing
StudyResult full_name domain NamedThing
StudyResult synonym domain NamedThing
StudyResult information_content domain NamedThing
StudyResult equivalent_identifiers domain NamedThing
ConceptCountAnalysisResult creation_date domain NamedThing
ConceptCountAnalysisResult provided_by domain NamedThing
ConceptCountAnalysisResult xref domain NamedThing
ConceptCountAnalysisResult full_name domain NamedThing
ConceptCountAnalysisResult synonym domain NamedThing
ConceptCountAnalysisResult information_content domain NamedThing
ConceptCountAnalysisResult equivalent_identifiers domain NamedThing
ObservedExpectedFrequencyAnalysisResult creation_date domain NamedThing
ObservedExpectedFrequencyAnalysisResult provided_by domain NamedThing
ObservedExpectedFrequencyAnalysisResult xref domain NamedThing
ObservedExpectedFrequencyAnalysisResult full_name domain NamedThing
ObservedExpectedFrequencyAnalysisResult synonym domain NamedThing
ObservedExpectedFrequencyAnalysisResult information_content domain NamedThing
ObservedExpectedFrequencyAnalysisResult equivalent_identifiers domain NamedThing
RelativeFrequencyAnalysisResult creation_date domain NamedThing
RelativeFrequencyAnalysisResult provided_by domain NamedThing
RelativeFrequencyAnalysisResult xref domain NamedThing
RelativeFrequencyAnalysisResult full_name domain NamedThing
RelativeFrequencyAnalysisResult synonym domain NamedThing
RelativeFrequencyAnalysisResult information_content domain NamedThing
RelativeFrequencyAnalysisResult equivalent_identifiers domain NamedThing
ChiSquaredAnalysisResult creation_date domain NamedThing
ChiSquaredAnalysisResult provided_by domain NamedThing
ChiSquaredAnalysisResult xref domain NamedThing
ChiSquaredAnalysisResult full_name domain NamedThing
ChiSquaredAnalysisResult synonym domain NamedThing
ChiSquaredAnalysisResult information_content domain NamedThing
ChiSquaredAnalysisResult equivalent_identifiers domain NamedThing
LogOddsAnalysisResult creation_date domain NamedThing
LogOddsAnalysisResult provided_by domain NamedThing
LogOddsAnalysisResult xref domain NamedThing
LogOddsAnalysisResult full_name domain NamedThing
LogOddsAnalysisResult synonym domain NamedThing
LogOddsAnalysisResult information_content domain NamedThing
LogOddsAnalysisResult equivalent_identifiers domain NamedThing
TextMiningStudyResult creation_date domain NamedThing
TextMiningStudyResult provided_by domain NamedThing
TextMiningStudyResult xref domain NamedThing
TextMiningStudyResult full_name domain NamedThing
TextMiningStudyResult synonym domain NamedThing
TextMiningStudyResult information_content domain NamedThing
TextMiningStudyResult equivalent_identifiers domain NamedThing
IceesStudyResult creation_date domain NamedThing
IceesStudyResult provided_by domain NamedThing
IceesStudyResult xref domain NamedThing
IceesStudyResult full_name domain NamedThing
IceesStudyResult synonym domain NamedThing
IceesStudyResult information_content domain NamedThing
IceesStudyResult equivalent_identifiers domain NamedThing
Study provided_by domain NamedThing
Study xref domain NamedThing
Study full_name domain NamedThing
Study synonym domain NamedThing
Study information_content domain NamedThing
Study equivalent_identifiers domain NamedThing
StudyVariable creation_date domain NamedThing
StudyVariable provided_by domain NamedThing
StudyVariable xref domain NamedThing
StudyVariable full_name domain NamedThing
StudyVariable synonym domain NamedThing
StudyVariable information_content domain NamedThing
StudyVariable equivalent_identifiers domain NamedThing
CommonDataElement creation_date domain NamedThing
CommonDataElement provided_by domain NamedThing
CommonDataElement xref domain NamedThing
CommonDataElement full_name domain NamedThing
CommonDataElement synonym domain NamedThing
CommonDataElement information_content domain NamedThing
CommonDataElement equivalent_identifiers domain NamedThing
Agent address domain NamedThing
Agent provided_by domain NamedThing
Agent xref domain NamedThing
Agent full_name domain NamedThing
Agent synonym domain NamedThing
Agent information_content domain NamedThing
Agent equivalent_identifiers domain NamedThing
InformationContentEntity creation_date domain NamedThing
InformationContentEntity provided_by domain NamedThing
InformationContentEntity xref domain NamedThing
InformationContentEntity full_name domain NamedThing
InformationContentEntity synonym domain NamedThing
InformationContentEntity information_content domain NamedThing
InformationContentEntity equivalent_identifiers domain NamedThing
Dataset creation_date domain NamedThing
Dataset provided_by domain NamedThing
Dataset xref domain NamedThing
Dataset full_name domain NamedThing
Dataset synonym domain NamedThing
Dataset information_content domain NamedThing
Dataset equivalent_identifiers domain NamedThing
DatasetDistribution creation_date domain NamedThing
DatasetDistribution provided_by domain NamedThing
DatasetDistribution xref domain NamedThing
DatasetDistribution full_name domain NamedThing
DatasetDistribution synonym domain NamedThing
DatasetDistribution information_content domain NamedThing
DatasetDistribution equivalent_identifiers domain NamedThing
DatasetVersion creation_date domain NamedThing
DatasetVersion provided_by domain NamedThing
DatasetVersion xref domain NamedThing
DatasetVersion full_name domain NamedThing
DatasetVersion synonym domain NamedThing
DatasetVersion information_content domain NamedThing
DatasetVersion equivalent_identifiers domain NamedThing
DatasetSummary creation_date domain NamedThing
DatasetSummary provided_by domain NamedThing
DatasetSummary xref domain NamedThing
DatasetSummary full_name domain NamedThing
DatasetSummary synonym domain NamedThing
DatasetSummary information_content domain NamedThing
DatasetSummary equivalent_identifiers domain NamedThing
ConfidenceLevel creation_date domain NamedThing
ConfidenceLevel provided_by domain NamedThing
ConfidenceLevel xref domain NamedThing
ConfidenceLevel full_name domain NamedThing
ConfidenceLevel synonym domain NamedThing
ConfidenceLevel information_content domain NamedThing
ConfidenceLevel equivalent_identifiers domain NamedThing
EvidenceType creation_date domain NamedThing
EvidenceType provided_by domain NamedThing
EvidenceType xref domain NamedThing
EvidenceType full_name domain NamedThing
EvidenceType synonym domain NamedThing
EvidenceType information_content domain NamedThing
EvidenceType equivalent_identifiers domain NamedThing
Publication xref domain NamedThing
Publication creation_date domain NamedThing
Publication provided_by domain NamedThing
Publication full_name domain NamedThing
Publication synonym domain NamedThing
Publication information_content domain NamedThing
Publication equivalent_identifiers domain NamedThing
Book xref domain NamedThing
Book creation_date domain NamedThing
Book provided_by domain NamedThing
Book full_name domain NamedThing
Book synonym domain NamedThing
Book information_content domain NamedThing
Book equivalent_identifiers domain NamedThing
BookChapter xref domain NamedThing
BookChapter creation_date domain NamedThing
BookChapter provided_by domain NamedThing
BookChapter full_name domain NamedThing
BookChapter synonym domain NamedThing
BookChapter information_content domain NamedThing
BookChapter equivalent_identifiers domain NamedThing
Serial xref domain NamedThing
Serial creation_date domain NamedThing
Serial provided_by domain NamedThing
Serial full_name domain NamedThing
Serial synonym domain NamedThing
Serial information_content domain NamedThing
Serial equivalent_identifiers domain NamedThing
Article xref domain NamedThing
Article creation_date domain NamedThing
Article provided_by domain NamedThing
Article full_name domain NamedThing
Article synonym domain NamedThing
Article information_content domain NamedThing
Article equivalent_identifiers domain NamedThing
JournalArticle xref domain NamedThing
JournalArticle creation_date domain NamedThing
JournalArticle provided_by domain NamedThing
JournalArticle full_name domain NamedThing
JournalArticle synonym domain NamedThing
JournalArticle information_content domain NamedThing
JournalArticle equivalent_identifiers domain NamedThing
Patent xref domain NamedThing
Patent creation_date domain NamedThing
Patent provided_by domain NamedThing
Patent full_name domain NamedThing
Patent synonym domain NamedThing
Patent information_content domain NamedThing
Patent equivalent_identifiers domain NamedThing
WebPage xref domain NamedThing
WebPage creation_date domain NamedThing
WebPage provided_by domain NamedThing
WebPage full_name domain NamedThing
WebPage synonym domain NamedThing
WebPage information_content domain NamedThing
WebPage equivalent_identifiers domain NamedThing
PreprintPublication xref domain NamedThing
PreprintPublication creation_date domain NamedThing
PreprintPublication provided_by domain NamedThing
PreprintPublication full_name domain NamedThing
PreprintPublication synonym domain NamedThing
PreprintPublication information_content domain NamedThing
PreprintPublication equivalent_identifiers domain NamedThing
DrugLabel xref domain NamedThing
DrugLabel creation_date domain NamedThing
DrugLabel provided_by domain NamedThing
DrugLabel full_name domain NamedThing
DrugLabel synonym domain NamedThing
DrugLabel information_content domain NamedThing
DrugLabel equivalent_identifiers domain NamedThing
RetrievalSource xref domain NamedThing
RetrievalSource creation_date domain NamedThing
RetrievalSource provided_by domain NamedThing
RetrievalSource full_name domain NamedThing
RetrievalSource synonym domain NamedThing
RetrievalSource information_content domain NamedThing
RetrievalSource equivalent_identifiers domain NamedThing
PhysicalEntity provided_by domain NamedThing
PhysicalEntity xref domain NamedThing
PhysicalEntity full_name domain NamedThing
PhysicalEntity synonym domain NamedThing
PhysicalEntity information_content domain NamedThing
PhysicalEntity equivalent_identifiers domain NamedThing
Activity provided_by domain NamedThing
Activity xref domain NamedThing
Activity full_name domain NamedThing
Activity synonym domain NamedThing
Activity information_content domain NamedThing
Activity equivalent_identifiers domain NamedThing
Procedure provided_by domain NamedThing
Procedure xref domain NamedThing
Procedure full_name domain NamedThing
Procedure synonym domain NamedThing
Procedure information_content domain NamedThing
Procedure equivalent_identifiers domain NamedThing
Phenomenon provided_by domain NamedThing
Phenomenon xref domain NamedThing
Phenomenon full_name domain NamedThing
Phenomenon synonym domain NamedThing
Phenomenon information_content domain NamedThing
Phenomenon equivalent_identifiers domain NamedThing
Device provided_by domain NamedThing
Device xref domain NamedThing
Device full_name domain NamedThing
Device synonym domain NamedThing
Device information_content domain NamedThing
Device equivalent_identifiers domain NamedThing
DiagnosticAid provided_by domain NamedThing
DiagnosticAid xref domain NamedThing
DiagnosticAid full_name domain NamedThing
DiagnosticAid synonym domain NamedThing
DiagnosticAid information_content domain NamedThing
DiagnosticAid equivalent_identifiers domain NamedThing
StudyPopulation provided_by domain NamedThing
StudyPopulation xref domain NamedThing
StudyPopulation full_name domain NamedThing
StudyPopulation synonym domain NamedThing
StudyPopulation information_content domain NamedThing
StudyPopulation equivalent_identifiers domain NamedThing
MaterialSample provided_by domain NamedThing
MaterialSample xref domain NamedThing
MaterialSample full_name domain NamedThing
MaterialSample synonym domain NamedThing
MaterialSample information_content domain NamedThing
MaterialSample equivalent_identifiers domain NamedThing
PlanetaryEntity provided_by domain NamedThing
PlanetaryEntity xref domain NamedThing
PlanetaryEntity full_name domain NamedThing
PlanetaryEntity synonym domain NamedThing
PlanetaryEntity information_content domain NamedThing
PlanetaryEntity equivalent_identifiers domain NamedThing
EnvironmentalProcess provided_by domain NamedThing
EnvironmentalProcess xref domain NamedThing
EnvironmentalProcess full_name domain NamedThing
EnvironmentalProcess synonym domain NamedThing
EnvironmentalProcess information_content domain NamedThing
EnvironmentalProcess equivalent_identifiers domain NamedThing
EnvironmentalFeature provided_by domain NamedThing
EnvironmentalFeature xref domain NamedThing
EnvironmentalFeature full_name domain NamedThing
EnvironmentalFeature synonym domain NamedThing
EnvironmentalFeature information_content domain NamedThing
EnvironmentalFeature equivalent_identifiers domain NamedThing
GeographicLocation latitude domain NamedThing
GeographicLocation longitude domain NamedThing
GeographicLocation provided_by domain NamedThing
GeographicLocation xref domain NamedThing
GeographicLocation full_name domain NamedThing
GeographicLocation synonym domain NamedThing
GeographicLocation information_content domain NamedThing
GeographicLocation equivalent_identifiers domain NamedThing
GeographicLocationAtTime latitude domain NamedThing
GeographicLocationAtTime longitude domain NamedThing
GeographicLocationAtTime provided_by domain NamedThing
GeographicLocationAtTime xref domain NamedThing
GeographicLocationAtTime full_name domain NamedThing
GeographicLocationAtTime synonym domain NamedThing
GeographicLocationAtTime information_content domain NamedThing
GeographicLocationAtTime equivalent_identifiers domain NamedThing
BiologicalEntity provided_by domain NamedThing
BiologicalEntity xref domain NamedThing
BiologicalEntity full_name domain NamedThing
BiologicalEntity synonym domain NamedThing
BiologicalEntity information_content domain NamedThing
BiologicalEntity equivalent_identifiers domain NamedThing
GenomicEntity has_biological_sequence domain NamedThing
EpigenomicEntity has_biological_sequence domain NamedThing
MolecularEntity available_from domain NamedThing
MolecularEntity max_tolerated_dose domain NamedThing
MolecularEntity is_toxic domain NamedThing
MolecularEntity has_chemical_role domain NamedThing
MolecularEntity provided_by domain NamedThing
MolecularEntity xref domain NamedThing
MolecularEntity full_name domain NamedThing
MolecularEntity synonym domain NamedThing
MolecularEntity information_content domain NamedThing
MolecularEntity equivalent_identifiers domain NamedThing
ChemicalEntity available_from domain NamedThing
ChemicalEntity max_tolerated_dose domain NamedThing
ChemicalEntity is_toxic domain NamedThing
ChemicalEntity has_chemical_role domain NamedThing
ChemicalEntity provided_by domain NamedThing
ChemicalEntity xref domain NamedThing
ChemicalEntity full_name domain NamedThing
ChemicalEntity synonym domain NamedThing
ChemicalEntity information_content domain NamedThing
ChemicalEntity equivalent_identifiers domain NamedThing
SmallMolecule available_from domain NamedThing
SmallMolecule max_tolerated_dose domain NamedThing
SmallMolecule is_toxic domain NamedThing
SmallMolecule has_chemical_role domain NamedThing
SmallMolecule provided_by domain NamedThing
SmallMolecule xref domain NamedThing
SmallMolecule full_name domain NamedThing
SmallMolecule synonym domain NamedThing
SmallMolecule information_content domain NamedThing
SmallMolecule equivalent_identifiers domain NamedThing
ChemicalMixture available_from domain NamedThing
ChemicalMixture max_tolerated_dose domain NamedThing
ChemicalMixture is_toxic domain NamedThing
ChemicalMixture has_chemical_role domain NamedThing
ChemicalMixture provided_by domain NamedThing
ChemicalMixture xref domain NamedThing
ChemicalMixture full_name domain NamedThing
ChemicalMixture synonym domain NamedThing
ChemicalMixture information_content domain NamedThing
ChemicalMixture equivalent_identifiers domain NamedThing
NucleicAcidEntity has_biological_sequence domain NamedThing
NucleicAcidEntity available_from domain NamedThing
NucleicAcidEntity max_tolerated_dose domain NamedThing
NucleicAcidEntity is_toxic domain NamedThing
NucleicAcidEntity has_chemical_role domain NamedThing
NucleicAcidEntity provided_by domain NamedThing
NucleicAcidEntity xref domain NamedThing
NucleicAcidEntity full_name domain NamedThing
NucleicAcidEntity synonym domain NamedThing
NucleicAcidEntity information_content domain NamedThing
NucleicAcidEntity equivalent_identifiers domain NamedThing
RegulatoryRegion has_biological_sequence domain NamedThing
RegulatoryRegion provided_by domain NamedThing
RegulatoryRegion xref domain NamedThing
RegulatoryRegion full_name domain NamedThing
RegulatoryRegion synonym domain NamedThing
RegulatoryRegion information_content domain NamedThing
RegulatoryRegion equivalent_identifiers domain NamedThing
AccessibleDnaRegion has_biological_sequence domain NamedThing
AccessibleDnaRegion provided_by domain NamedThing
AccessibleDnaRegion xref domain NamedThing
AccessibleDnaRegion full_name domain NamedThing
AccessibleDnaRegion synonym domain NamedThing
AccessibleDnaRegion information_content domain NamedThing
AccessibleDnaRegion equivalent_identifiers domain NamedThing
TranscriptionFactorBindingSite has_biological_sequence domain NamedThing
TranscriptionFactorBindingSite provided_by domain NamedThing
TranscriptionFactorBindingSite xref domain NamedThing
TranscriptionFactorBindingSite full_name domain NamedThing
TranscriptionFactorBindingSite synonym domain NamedThing
TranscriptionFactorBindingSite information_content domain NamedThing
TranscriptionFactorBindingSite equivalent_identifiers domain NamedThing
MolecularMixture available_from domain NamedThing
MolecularMixture max_tolerated_dose domain NamedThing
MolecularMixture is_toxic domain NamedThing
MolecularMixture has_chemical_role domain NamedThing
MolecularMixture provided_by domain NamedThing
MolecularMixture xref domain NamedThing
MolecularMixture full_name domain NamedThing
MolecularMixture synonym domain NamedThing
MolecularMixture information_content domain NamedThing
MolecularMixture equivalent_identifiers domain NamedThing
ComplexMolecularMixture available_from domain NamedThing
ComplexMolecularMixture max_tolerated_dose domain NamedThing
ComplexMolecularMixture is_toxic domain NamedThing
ComplexMolecularMixture has_chemical_role domain NamedThing
ComplexMolecularMixture provided_by domain NamedThing
ComplexMolecularMixture xref domain NamedThing
ComplexMolecularMixture full_name domain NamedThing
ComplexMolecularMixture synonym domain NamedThing
ComplexMolecularMixture information_content domain NamedThing
ComplexMolecularMixture equivalent_identifiers domain NamedThing
BiologicalProcessOrActivity has_input range NamedThing
BiologicalProcessOrActivity has_output range NamedThing
BiologicalProcessOrActivity provided_by domain NamedThing
BiologicalProcessOrActivity xref domain NamedThing
BiologicalProcessOrActivity full_name domain NamedThing
BiologicalProcessOrActivity synonym domain NamedThing
BiologicalProcessOrActivity information_content domain NamedThing
BiologicalProcessOrActivity equivalent_identifiers domain NamedThing
MolecularActivity provided_by domain NamedThing
MolecularActivity xref domain NamedThing
MolecularActivity full_name domain NamedThing
MolecularActivity synonym domain NamedThing
MolecularActivity information_content domain NamedThing
MolecularActivity equivalent_identifiers domain NamedThing
BiologicalProcess has_input range NamedThing
BiologicalProcess has_output range NamedThing
BiologicalProcess provided_by domain NamedThing
BiologicalProcess xref domain NamedThing
BiologicalProcess full_name domain NamedThing
BiologicalProcess synonym domain NamedThing
BiologicalProcess information_content domain NamedThing
BiologicalProcess equivalent_identifiers domain NamedThing
Pathway has_input range NamedThing
Pathway has_output range NamedThing
Pathway provided_by domain NamedThing
Pathway xref domain NamedThing
Pathway full_name domain NamedThing
Pathway synonym domain NamedThing
Pathway information_content domain NamedThing
Pathway equivalent_identifiers domain NamedThing
PhysiologicalProcess has_input range NamedThing
PhysiologicalProcess has_output range NamedThing
PhysiologicalProcess provided_by domain NamedThing
PhysiologicalProcess xref domain NamedThing
PhysiologicalProcess full_name domain NamedThing
PhysiologicalProcess synonym domain NamedThing
PhysiologicalProcess information_content domain NamedThing
PhysiologicalProcess equivalent_identifiers domain NamedThing
Behavior has_input range NamedThing
Behavior has_output range NamedThing
Behavior provided_by domain NamedThing
Behavior xref domain NamedThing
Behavior full_name domain NamedThing
Behavior synonym domain NamedThing
Behavior information_content domain NamedThing
Behavior equivalent_identifiers domain NamedThing
ProcessedMaterial available_from domain NamedThing
ProcessedMaterial max_tolerated_dose domain NamedThing
ProcessedMaterial is_toxic domain NamedThing
ProcessedMaterial has_chemical_role domain NamedThing
ProcessedMaterial provided_by domain NamedThing
ProcessedMaterial xref domain NamedThing
ProcessedMaterial full_name domain NamedThing
ProcessedMaterial synonym domain NamedThing
ProcessedMaterial information_content domain NamedThing
ProcessedMaterial equivalent_identifiers domain NamedThing
Drug available_from domain NamedThing
Drug max_tolerated_dose domain NamedThing
Drug is_toxic domain NamedThing
Drug has_chemical_role domain NamedThing
Drug provided_by domain NamedThing
Drug xref domain NamedThing
Drug full_name domain NamedThing
Drug synonym domain NamedThing
Drug information_content domain NamedThing
Drug equivalent_identifiers domain NamedThing
EnvironmentalFoodContaminant available_from domain NamedThing
EnvironmentalFoodContaminant max_tolerated_dose domain NamedThing
EnvironmentalFoodContaminant is_toxic domain NamedThing
EnvironmentalFoodContaminant has_chemical_role domain NamedThing
EnvironmentalFoodContaminant provided_by domain NamedThing
EnvironmentalFoodContaminant xref domain NamedThing
EnvironmentalFoodContaminant full_name domain NamedThing
EnvironmentalFoodContaminant synonym domain NamedThing
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NamedThingAssociatedWithLikelihoodOfNamedThingAssociation subject range NamedThing
NamedThingAssociatedWithLikelihoodOfNamedThingAssociation object range NamedThing
NamedThingAssociatedWithLikelihoodOfNamedThingAssociation update_date domain NamedThing
ChemicalGeneInteractionAssociation update_date domain NamedThing
GeneRegulatesGeneAssociation update_date domain NamedThing
ProcessRegulatesProcessAssociation update_date domain NamedThing
ChemicalAffectsBiologicalEntityAssociation update_date domain NamedThing
ChemicalAffectsGeneAssociation update_date domain NamedThing
GeneAffectsChemicalAssociation update_date domain NamedThing
DrugToGeneAssociation update_date domain NamedThing
MaterialSampleToEntityAssociationMixin object range NamedThing
MaterialSampleDerivationAssociation object range NamedThing
MaterialSampleDerivationAssociation update_date domain NamedThing
MaterialSampleToDiseaseOrPhenotypicFeatureAssociation update_date domain NamedThing
DiseaseToEntityAssociationMixin object range NamedThing
EntityToExposureEventAssociationMixin subject range NamedThing
DiseaseToExposureEventAssociation update_date domain NamedThing
EntityToOutcomeAssociationMixin subject range NamedThing
ExposureEventToOutcomeAssociation subject range NamedThing
ExposureEventToOutcomeAssociation update_date domain NamedThing
FrequencyQualifierMixin subject range NamedThing
FrequencyQualifierMixin object range NamedThing
EntityToFeatureOrDiseaseQualifiersMixin subject range NamedThing
EntityToFeatureOrDiseaseQualifiersMixin object range NamedThing
EntityToFeatureOrVariantQualifiersMixin subject range NamedThing
EntityToFeatureOrVariantQualifiersMixin object range NamedThing
EntityToFeatureOrGeneQualifiersMixin subject range NamedThing
EntityToFeatureOrGeneQualifiersMixin object range NamedThing
FeatureOrDiseaseQualifiersToEntityMixin subject range NamedThing
FeatureOrDiseaseQualifiersToEntityMixin object range NamedThing
EntityToPhenotypicFeatureAssociationMixin subject range NamedThing
EntityToPhenotypicFeatureAssociationMixin has_count domain NamedThing
EntityToPhenotypicFeatureAssociationMixin has_total domain NamedThing
EntityToPhenotypicFeatureAssociationMixin has_quotient domain NamedThing
EntityToPhenotypicFeatureAssociationMixin has_percentage domain NamedThing
PhenotypicFeatureToEntityAssociationMixin has_count domain NamedThing
PhenotypicFeatureToEntityAssociationMixin has_total domain NamedThing
PhenotypicFeatureToEntityAssociationMixin has_quotient domain NamedThing
PhenotypicFeatureToEntityAssociationMixin has_percentage domain NamedThing
PhenotypicFeatureToEntityAssociationMixin object range NamedThing
PhenotypicFeatureToPhenotypicFeatureAssociation update_date domain NamedThing
PhenotypicFeatureToPhenotypicFeatureAssociation has_count domain NamedThing
PhenotypicFeatureToPhenotypicFeatureAssociation has_total domain NamedThing
PhenotypicFeatureToPhenotypicFeatureAssociation has_quotient domain NamedThing
PhenotypicFeatureToPhenotypicFeatureAssociation has_percentage domain NamedThing
InformationContentEntityToNamedThingAssociation subject range NamedThing
InformationContentEntityToNamedThingAssociation object range NamedThing
InformationContentEntityToNamedThingAssociation update_date domain NamedThing
EntityToDiseaseAssociationMixin subject range NamedThing
DiseaseOrPhenotypicFeatureToEntityAssociationMixin object range NamedThing
DiseaseOrPhenotypicFeatureToLocationAssociation update_date domain NamedThing
DiseaseOrPhenotypicFeatureToGeneticInheritanceAssociation update_date domain NamedThing
EntityToDiseaseOrPhenotypicFeatureAssociationMixin subject range NamedThing
GenotypeToEntityAssociationMixin object range NamedThing
GenotypeToPhenotypicFeatureAssociation update_date domain NamedThing
GenotypeToPhenotypicFeatureAssociation has_count domain NamedThing
GenotypeToPhenotypicFeatureAssociation has_total domain NamedThing
GenotypeToPhenotypicFeatureAssociation has_quotient domain NamedThing
GenotypeToPhenotypicFeatureAssociation has_percentage domain NamedThing
ExposureEventToPhenotypicFeatureAssociation update_date domain NamedThing
ExposureEventToPhenotypicFeatureAssociation has_count domain NamedThing
ExposureEventToPhenotypicFeatureAssociation has_total domain NamedThing
ExposureEventToPhenotypicFeatureAssociation has_quotient domain NamedThing
ExposureEventToPhenotypicFeatureAssociation has_percentage domain NamedThing
DiseaseToPhenotypicFeatureAssociation has_count domain NamedThing
DiseaseToPhenotypicFeatureAssociation has_total domain NamedThing
DiseaseToPhenotypicFeatureAssociation has_quotient domain NamedThing
DiseaseToPhenotypicFeatureAssociation has_percentage domain NamedThing
DiseaseToPhenotypicFeatureAssociation update_date domain NamedThing
CaseToPhenotypicFeatureAssociation update_date domain NamedThing
CaseToPhenotypicFeatureAssociation has_count domain NamedThing
CaseToPhenotypicFeatureAssociation has_total domain NamedThing
CaseToPhenotypicFeatureAssociation has_quotient domain NamedThing
CaseToPhenotypicFeatureAssociation has_percentage domain NamedThing
CaseToDiseaseAssociation update_date domain NamedThing
CaseToVariantAssociation update_date domain NamedThing
CaseToGeneAssociation update_date domain NamedThing
BehaviorToBehavioralFeatureAssociation update_date domain NamedThing
BehaviorToBehavioralFeatureAssociation has_count domain NamedThing
BehaviorToBehavioralFeatureAssociation has_total domain NamedThing
BehaviorToBehavioralFeatureAssociation has_quotient domain NamedThing
BehaviorToBehavioralFeatureAssociation has_percentage domain NamedThing
GeneToEntityAssociationMixin object range NamedThing
VariantToEntityAssociationMixin object range NamedThing
GeneToDiseaseOrPhenotypicFeatureAssociation update_date domain NamedThing
GeneToDiseaseOrPhenotypicFeatureAssociation has_count domain NamedThing
GeneToDiseaseOrPhenotypicFeatureAssociation has_total domain NamedThing
GeneToDiseaseOrPhenotypicFeatureAssociation has_quotient domain NamedThing
GeneToDiseaseOrPhenotypicFeatureAssociation has_percentage domain NamedThing
GeneToPhenotypicFeatureAssociation update_date domain NamedThing
GeneToPhenotypicFeatureAssociation has_count domain NamedThing
GeneToPhenotypicFeatureAssociation has_total domain NamedThing
GeneToPhenotypicFeatureAssociation has_quotient domain NamedThing
GeneToPhenotypicFeatureAssociation has_percentage domain NamedThing
GeneToDiseaseAssociation update_date domain NamedThing
GeneToDiseaseAssociation has_count domain NamedThing
GeneToDiseaseAssociation has_total domain NamedThing
GeneToDiseaseAssociation has_quotient domain NamedThing
GeneToDiseaseAssociation has_percentage domain NamedThing
CausalGeneToDiseaseAssociation update_date domain NamedThing
CausalGeneToDiseaseAssociation has_count domain NamedThing
CausalGeneToDiseaseAssociation has_total domain NamedThing
CausalGeneToDiseaseAssociation has_quotient domain NamedThing
CausalGeneToDiseaseAssociation has_percentage domain NamedThing
CorrelatedGeneToDiseaseAssociation update_date domain NamedThing
CorrelatedGeneToDiseaseAssociation has_count domain NamedThing
CorrelatedGeneToDiseaseAssociation has_total domain NamedThing
CorrelatedGeneToDiseaseAssociation has_quotient domain NamedThing
CorrelatedGeneToDiseaseAssociation has_percentage domain NamedThing
DruggableGeneToDiseaseAssociation update_date domain NamedThing
DruggableGeneToDiseaseAssociation has_count domain NamedThing
DruggableGeneToDiseaseAssociation has_total domain NamedThing
DruggableGeneToDiseaseAssociation has_quotient domain NamedThing
DruggableGeneToDiseaseAssociation has_percentage domain NamedThing
PhenotypicFeatureToDiseaseAssociation update_date domain NamedThing
PhenotypicFeatureToDiseaseAssociation has_count domain NamedThing
PhenotypicFeatureToDiseaseAssociation has_total domain NamedThing
PhenotypicFeatureToDiseaseAssociation has_quotient domain NamedThing
PhenotypicFeatureToDiseaseAssociation has_percentage domain NamedThing
VariantToGeneAssociation update_date domain NamedThing
VariantToGeneExpressionAssociation update_date domain NamedThing
VariantToPopulationAssociation has_count domain NamedThing
VariantToPopulationAssociation has_total domain NamedThing
VariantToPopulationAssociation has_quotient domain NamedThing
VariantToPopulationAssociation has_percentage domain NamedThing
VariantToPopulationAssociation update_date domain NamedThing
PopulationToPopulationAssociation update_date domain NamedThing
VariantToPhenotypicFeatureAssociation update_date domain NamedThing
VariantToPhenotypicFeatureAssociation has_count domain NamedThing
VariantToPhenotypicFeatureAssociation has_total domain NamedThing
VariantToPhenotypicFeatureAssociation has_quotient domain NamedThing
VariantToPhenotypicFeatureAssociation has_percentage domain NamedThing
VariantToDiseaseAssociation update_date domain NamedThing
GenotypeToDiseaseAssociation update_date domain NamedThing
ModelToDiseaseAssociationMixin subject range NamedThing
ModelToDiseaseAssociationMixin object range NamedThing
GeneAsAModelOfDiseaseAssociation update_date domain NamedThing
GeneAsAModelOfDiseaseAssociation has_count domain NamedThing
GeneAsAModelOfDiseaseAssociation has_total domain NamedThing
GeneAsAModelOfDiseaseAssociation has_quotient domain NamedThing
GeneAsAModelOfDiseaseAssociation has_percentage domain NamedThing
VariantAsAModelOfDiseaseAssociation update_date domain NamedThing
GenotypeAsAModelOfDiseaseAssociation update_date domain NamedThing
CellLineAsAModelOfDiseaseAssociation update_date domain NamedThing
OrganismalEntityAsAModelOfDiseaseAssociation update_date domain NamedThing
OrganismToOrganismAssociation update_date domain NamedThing
TaxonToTaxonAssociation update_date domain NamedThing
GeneHasVariantThatContributesToDiseaseAssociation update_date domain NamedThing
GeneHasVariantThatContributesToDiseaseAssociation has_count domain NamedThing
GeneHasVariantThatContributesToDiseaseAssociation has_total domain NamedThing
GeneHasVariantThatContributesToDiseaseAssociation has_quotient domain NamedThing
GeneHasVariantThatContributesToDiseaseAssociation has_percentage domain NamedThing
GeneToExpressionSiteAssociation update_date domain NamedThing
SequenceVariantModulatesTreatmentAssociation update_date domain NamedThing
FunctionalAssociation update_date domain NamedThing
MacromolecularMachineToEntityAssociationMixin subject range NamedThing
MacromolecularMachineToEntityAssociationMixin object range NamedThing
MacromolecularMachineToMolecularActivityAssociation update_date domain NamedThing
MacromolecularMachineToBiologicalProcessAssociation update_date domain NamedThing
MacromolecularMachineToCellularComponentAssociation update_date domain NamedThing
MolecularActivityToChemicalEntityAssociation update_date domain NamedThing
MolecularActivityToMolecularActivityAssociation update_date domain NamedThing
GeneToGoTermAssociation update_date domain NamedThing
EntityToDiseaseAssociation subject range NamedThing
EntityToDiseaseAssociation object range NamedThing
EntityToDiseaseAssociation update_date domain NamedThing
EntityToPhenotypicFeatureAssociation subject range NamedThing
EntityToPhenotypicFeatureAssociation object range NamedThing
EntityToPhenotypicFeatureAssociation update_date domain NamedThing
SequenceAssociation subject range NamedThing
SequenceAssociation object range NamedThing
SequenceAssociation update_date domain NamedThing
GenomicSequenceLocalization update_date domain NamedThing
SequenceFeatureRelationship update_date domain NamedThing
TranscriptToGeneRelationship update_date domain NamedThing
GeneToGeneProductRelationship update_date domain NamedThing
ExonToTranscriptRelationship update_date domain NamedThing
ChemicalEntityOrGeneOrGeneProductRegulatesGeneAssociation update_date domain NamedThing
AnatomicalEntityToAnatomicalEntityAssociation update_date domain NamedThing
AnatomicalEntityToAnatomicalEntityPartOfAssociation update_date domain NamedThing
AnatomicalEntityToAnatomicalEntityOntogenicAssociation update_date domain NamedThing
GeneOrGeneProductOrGeneFamilyToAnatomicalEntityAssociation update_date domain NamedThing
BiologicalProcessOrActivityToAnatomicalEntityAssociation update_date domain NamedThing
OrganismTaxonToEntityAssociation object range NamedThing
OrganismTaxonToOrganismTaxonAssociation update_date domain NamedThing
OrganismTaxonToOrganismTaxonSpecialization update_date domain NamedThing
OrganismTaxonToOrganismTaxonInteraction update_date domain NamedThing
OrganismTaxonToEnvironmentAssociation object range NamedThing
OrganismTaxonToEnvironmentAssociation update_date domain NamedThing

LinkML Source

name: named thing
description: a databased entity or concept/class
from_schema: https://w3id.org/biolink/biolink-model
exact_mappings:
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- WIKIDATA:Q35120
- UMLSSG:OBJC
- STY:T071
- dcid:Thing
is_a: entity
slots:
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slot_usage:
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