Enum: IngestCategoryEnum
The type of source being ingested, from the perspective of the ingesting system.
Permissible Values
Value |
Meaning |
Description |
primary_knowledge_provider |
None |
Provides knowledge that is curated/created/mined by the source (e.g. via literature curation/interpretation, analysis of datasets, inference over evidence) |
aggregation_provider |
None |
Aggregates knowledge from external sources and provides as is - with minimal alteration/interpretation of what the primary source reported. (e.g. Monarch, Diseases, Pharos) |
aggregation_interpreter |
None |
Aggregates knowledge and assesses/interprets it as evidence to draw and report its own conclusion (e.g. DGIdb, DisGenNet) |
supporting_data_provider |
None |
Provides information (data or prior facts) that is subsequently analyzed/ interpreted by a Translator tool to derive new knowledge (e.g. TCGA, GTex, Carolina Data Warehouse) |
translator_knowledge_creator |
None |
A Translator tool that generates de novo knowledge from statistical analysis, interpretation, or reasoning with more foundational data/ or facts (e.g. ICEES, COHD, Multiomics Wellness, BigGIM) |
ontology_provider |
None |
An ontology or terminology artifact providing concept identifiers, definitions, mappings, hierarchical relationships that are ingested into Translator KGs |
node_property_only_provider |
None |
Provides only information that is used to annotate nodes of a particular kind in Translator graphs. |
other |
None |
Used when the information provided by a source is not known, or does not fit into the defined categories above |
Slots constrained by this enum
LinkML Source
name: IngestCategoryEnum
description: The type of source being ingested, from the perspective of the ingesting
system.
from_schema: https://w3id.org/biolink/resource-ingest-guide-schema
permissible_values:
primary_knowledge_provider:
text: primary_knowledge_provider
description: Provides knowledge that is curated/created/mined by the source (e.g.
via literature curation/interpretation, analysis of datasets, inference over
evidence)
aggregation_provider:
text: aggregation_provider
description: Aggregates knowledge from external sources and provides as is - with minimal
alteration/interpretation of what the primary source reported. (e.g. Monarch,
Diseases, Pharos)
aggregation_interpreter:
text: aggregation_interpreter
description: Aggregates knowledge and assesses/interprets it as evidence to draw
and report its own conclusion (e.g. DGIdb, DisGenNet)
supporting_data_provider:
text: supporting_data_provider
description: Provides information (data or prior facts) that is subsequently analyzed/
interpreted by a Translator tool to derive new knowledge (e.g. TCGA, GTex,
Carolina Data Warehouse)
translator_knowledge_creator:
text: translator_knowledge_creator
description: A Translator tool that generates de novo knowledge from statistical analysis,
interpretation, or reasoning with more foundational data/ or facts (e.g. ICEES,
COHD, Multiomics Wellness, BigGIM)
ontology_provider:
text: ontology_provider
description: An ontology or terminology artifact providing concept identifiers, definitions,
mappings, hierarchical relationships that are ingested into Translator KGs
node_property_only_provider:
text: node_property_only_provider
description: Provides only information that is used to annotate nodes of a particular
kind in Translator graphs.
other:
text: other
description: Used when the information provided by a source is not known, or does
not fit into the defined categories above