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Enum: IngestCategoryEnum

The type of source being ingested, from the perspective of the ingesting system.

Permissible Values

Value Meaning Description
primary_knowledge_provider None Provides knowledge that is curated/created/mined by the source (e.g. via literature curation/interpretation, analysis of datasets, inference over evidence)
aggregation_provider None Aggregates knowledge from external sources and provides as is - with minimal alteration/interpretation of what the primary source reported. (e.g. Monarch, Diseases, Pharos)
aggregation_interpreter None Aggregates knowledge and assesses/interprets it as evidence to draw and report its own conclusion (e.g. DGIdb, DisGenNet)
supporting_data_provider None Provides information (data or prior facts) that is subsequently analyzed/ interpreted by a Translator tool to derive new knowledge (e.g. TCGA, GTex, Carolina Data Warehouse)
translator_knowledge_creator None A Translator tool that generates de novo knowledge from statistical analysis, interpretation, or reasoning with more foundational data/ or facts (e.g. ICEES, COHD, Multiomics Wellness, BigGIM)
ontology_provider None An ontology or terminology artifact providing concept identifiers, definitions, mappings, hierarchical relationships that are ingested into Translator KGs
node_property_only_provider None Provides only information that is used to annotate nodes of a particular kind in Translator graphs.
other None Used when the information provided by a source is not known, or does not fit into the defined categories above

Slots constrained by this enum

Name
ingest_categories

LinkML Source

name: IngestCategoryEnum
description: The type of source being ingested, from the perspective of the ingesting
  system.
from_schema: https://w3id.org/biolink/resource-ingest-guide-schema
permissible_values:
  primary_knowledge_provider:
    text: primary_knowledge_provider
    description: Provides knowledge that is curated/created/mined by the source (e.g.
      via  literature curation/interpretation, analysis of datasets, inference over
      evidence)
  aggregation_provider:
    text: aggregation_provider
    description: Aggregates knowledge from external sources and provides as is - with  minimal
      alteration/interpretation of what the primary source reported.  (e.g. Monarch,
      Diseases, Pharos)
  aggregation_interpreter:
    text: aggregation_interpreter
    description: Aggregates knowledge and assesses/interprets it as evidence to draw
      and report its  own conclusion (e.g. DGIdb, DisGenNet)
  supporting_data_provider:
    text: supporting_data_provider
    description: Provides information (data or prior facts) that is subsequently analyzed/
      interpreted  by a Translator tool to derive new knowledge (e.g. TCGA, GTex,
      Carolina Data Warehouse)
  translator_knowledge_creator:
    text: translator_knowledge_creator
    description: A Translator tool that generates de novo knowledge from statistical  analysis,
      interpretation, or reasoning with more foundational data/ or facts  (e.g. ICEES,
      COHD, Multiomics Wellness, BigGIM)
  ontology_provider:
    text: ontology_provider
    description: An ontology or terminology artifact providing concept identifiers,  definitions,
      mappings, hierarchical relationships that are ingested into Translator KGs
  node_property_only_provider:
    text: node_property_only_provider
    description: Provides only information that is used to annotate nodes of a particular
      kind in  Translator graphs.
  other:
    text: other
    description: Used when the information provided by a source is not known, or does
      not fit into  the defined categories above