Enum: KnowledgeLevelEnum
The level of knowledge that supports an edge or node. This is a general categorization of the type of evidence that supports a statement, and is not intended to be a comprehensive description of the evidence. For example, a statement may be supported by a single publication, but that publication may contain multiple types of evidence, such as a computational prediction and a manual curation. In this case, the knowledge level would be "curated", and the evidence would be described in more detail in the evidence graph.
Permissible Values
Value |
Meaning |
Description |
curated |
None |
knowledge generated through manual curation or interpretation of data or published study results |
predicted |
None |
predictions generated computationally through inference over less direct forms of evidence (without human intervention or review) |
text_mined |
None |
knowledge extracted from published text by NLP agents (without human intervention or review) |
correlation |
None |
statistical correlations calculated between variables in a clinical or omics dataset, by an automated analysis pipeline |
observed |
None |
edge reports a phenomenon that was reported/observed to have occurred (and possibly some quantification, e.g. how many times, at what frequency) |
other |
None |
knowledge level may not fit into the categories above, or is not provided/known |
mixed |
None |
used for sources that might provide edges with different knowledge levels, e.g.correlations in addition to curated Edges - set tag to Curated, unless predicate rules override |
Slots constrained by this enum
LinkML Source
name: KnowledgeLevelEnum
description: The level of knowledge that supports an edge or node. This is a general
categorization of the type of evidence that supports a statement, and is not intended
to be a comprehensive description of the evidence. For example, a statement may
be supported by a single publication, but that publication may contain multiple
types of evidence, such as a computational prediction and a manual curation. In
this case, the knowledge level would be "curated", and the evidence would be described
in more detail in the evidence graph.
from_schema: https://w3id.org/biolink/information_resource_registry.yaml
permissible_values:
curated:
text: curated
description: knowledge generated through manual curation or interpretation of
data or published study results
predicted:
text: predicted
description: predictions generated computationally through inference over less
direct forms of evidence (without human intervention or review)
text_mined:
text: text_mined
description: knowledge extracted from published text by NLP agents (without human
intervention or review)
correlation:
text: correlation
description: statistical correlations calculated between variables in a clinical
or omics dataset, by an automated analysis pipeline
observed:
text: observed
description: edge reports a phenomenon that was reported/observed to have occurred
(and possibly some quantification, e.g. how many times, at what frequency)
other:
text: other
description: knowledge level may not fit into the categories above, or is not
provided/known
mixed:
text: mixed
description: used for sources that might provide edges with different knowledge
levels, e.g.correlations in addition to curated Edges - set tag to Curated,
unless predicate rules override