biolinkml

DEPRECATED: replaced by linkml

This project is maintained by biolink

BiolinkML representation generators

command line module Generator name function help file
gen-yaml yamlgen.py YamlGenerator Validate YAML or emit compiled module yamlgen help
gen-jsonld-context jsonldcontextgen.py ContextGenerator generate a JSON-LD @context block contextgen help
gen-csv csvgen.py CsvGenerator generate a csv summary csvgen help
gen-graphviz dotgen.py DotGenerator generate graphviz representation dotgen help
gen-golr-views golrgen.py GolrSchemaGenerator generate a GOLR(?) representation golrgen help
gen-graphql graphqlgen.py GraphqlGenerator generate a graphql representation graphql help
gen-prolog lpgen.py LogicProgramGenerator generate prolog representation prolog help
gen-proto protogen.py ProtoGenerator generate Protobuf Schema representation proto help
gen-jsonld jsonldgen.py JSONLDGenerator generate JSON representation jsonld help
gen-json-schema jsonschemagen.py JsonSchemaGenerator generate JSON Schema representation jsonschmeagen help
gen-markdown markdowngen.py MarkdownGenerator generate markdown documentation of the model markdowngen help
gen-namespaces namespacegen.py NamespaceGenerator generate namespace manager for URI’s in model namespacegen help
gen-owl owlgen.py OwlSchemaGenerator generate an OWL representation owlgen help
gen-proto protogen.py ProtoGenerator generate a proto(?) representation protogen help
gen-python pythongen.py PythonGenerator generate python classes for a model pythongen help
gen-rdf rdfgen.py RDFGenerator generate RDF representation of model rdfgen help
gen-shex shexgen.py ShExGenerator generate a ShEx model representation shexgen help
gen-yuml yumlgen.py YumlGenerator generate YUML representation via YUML yumlgen help