Slot: species_context_qualifier
Description: A statement qualifier representing a taxonomic category of species in which a relationship expressed in an association took place.
Notes: Ontology CURIEs are expected as values here, the examples below are intended to help clarify the content of the CURIEs.
Notes: Ontology CURIEs are expected as values here, the examples below are intended to help clarify the content of the CURIEs.
Domain: Association
Range: OrganismTaxon
Inheritance
- association_slot
- qualifier
- statement_qualifier
- species_context_qualifier
- statement_qualifier
- qualifier
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| GeneRegulatesGeneAssociation | Describes a regulatory relationship between two genes or gene products. | no |
| GeneAffectsChemicalAssociation | Describes an effect that a gene or gene product has on a chemical entity (e.g. an impact of on its abundance, activity, localization, processing, transport, etc.) | yes |
| MacromolecularMachineToEntityAssociationMixin | an association which has a macromolecular machine mixin as a subject | no |
| PredicateMapping | A deprecated predicate mapping object contains the deprecated predicate and an example of the rewiring that should be done to use a qualified statement in its place. | no |
| ChemicalAffectsGeneAssociation | Describes an effect that a chemical has on a gene or gene product (e.g. an impact of on its abundance, activity,localization, processing, expression, etc.) | yes |
Example values
| Slot Name | Value |
|---|---|
| species_context_qualifier | zebrafish |
| species_context_qualifier | human |
LinkML Source
name: species context qualifier
description: A statement qualifier representing a taxonomic category of species in
which a relationship expressed in an association took place.
notes:
- Ontology CURIEs are expected as values here, the examples below are intended to
help clarify the content of the CURIEs.
examples:
- value: zebrafish
- value: human
in_subset:
- translator_minimal
from_schema: https://w3id.org/biolink/biolink-model
is_a: statement qualifier
domain: association
alias: species_context_qualifier
domain_of:
- predicate mapping
- gene regulates gene association
- chemical affects gene association
- gene affects chemical association
- macromolecular machine to entity association mixin
range: organism taxon