Slot: sequence_localization_attribute

Description: An attribute that can be applied to a genome sequence localization edge. These edges connect a nucleic acid entity such as an exon to an entity such as a chromosome. Edge properties are used to ascribe specific positional information and other metadata to the localization. In pragmatic terms this can be thought of as columns in a GFF3 line.

Domain: GenomicSequenceLocalization
Range: String

Inheritance

• association_slot
  • sequence_localization_attribute
    • base_coordinate
    • interbase_coordinate
    • genome_build
    • strand
    • phase

LinkML Source

name: sequence localization attribute
description: An attribute that can be applied to a genome sequence localization edge.
  These edges connect a nucleic acid entity such as an exon to an entity such as a
  chromosome. Edge properties are used to ascribe specific positional information
  and other metadata to the localization. In pragmatic terms this can be thought of
  as columns in a GFF3 line.
from_schema: https://w3id.org/biolink/biolink-model
is_a: association slot
domain: genomic sequence localization
alias: sequence_localization_attribute
range: string