Slot: primary_knowledge_source
Description: The most upstream source of the knowledge expressed in an Association that an implementer can identify. Performing a rigorous analysis of upstream data providers is expected; every effort is made to catalog the most upstream source of data in this property. Only one data source should be declared primary in any association. "aggregator knowledge source" can be used to capture non-primary sources.
Notes: For example: a single ChemicalToGene Edge originally curated by ClinicalTrials.org, is aggregated by ChEMBL, then incorporated into the MolePro KP, then sent via TRAPI message to the ARAGORN ARA, and finally sent to the NCATS ARS. The retrieval path for this Edge is as follows: ARS--retrieved_from--> ARAGORN --retrieved_from--> MolePro --retrieved_from--> ChEMBL --retrieved_from--> ClinicalTrials.gov The "primary knowledge source" for this edge is "infores:clinical-trials-gov". "infores:chembl" and "infores:molecular_data_provider" are listed in the "aggregator knowledge source" property.
Notes: For example: a single ChemicalToGene Edge originally curated by ClinicalTrials.org, is aggregated by ChEMBL, then incorporated into the MolePro KP, then sent via TRAPI message to the ARAGORN ARA, and finally sent to the NCATS ARS. The retrieval path for this Edge is as follows: ARS--retrieved_from--> ARAGORN --retrieved_from--> MolePro --retrieved_from--> ChEMBL --retrieved_from--> ClinicalTrials.gov The "primary knowledge source" for this edge is "infores:clinical-trials-gov". "infores:chembl" and "infores:molecular_data_provider" are listed in the "aggregator knowledge source" property.
Domain: Association
Range: String
Inheritance
- association_slot
- knowledge_source
- primary_knowledge_source
- knowledge_source
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| Association | A typed association between two entities, supported by evidence | no |
LinkML Source
name: primary knowledge source
description: The most upstream source of the knowledge expressed in an Association
that an implementer can identify. Performing a rigorous analysis of upstream data
providers is expected; every effort is made to catalog the most upstream source
of data in this property. Only one data source should be declared primary in any
association. "aggregator knowledge source" can be used to capture non-primary sources.
notes:
- 'For example: a single ChemicalToGene Edge originally curated by ClinicalTrials.org,
is aggregated by ChEMBL, then incorporated into the MolePro KP, then sent via TRAPI
message to the ARAGORN ARA, and finally sent to the NCATS ARS. The retrieval path
for this Edge is as follows: ARS--retrieved_from--> ARAGORN --retrieved_from--> MolePro --retrieved_from-->
ChEMBL --retrieved_from--> ClinicalTrials.gov The "primary knowledge source" for
this edge is "infores:clinical-trials-gov". "infores:chembl" and "infores:molecular_data_provider"
are listed in the "aggregator knowledge source" property.'
from_schema: https://w3id.org/biolink/biolink-model
is_a: knowledge source
domain: association
alias: primary_knowledge_source
domain_of:
- association
range: string
multivalued: false