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Installation and Usage Notes
Working with Biolink Model
Browse Biolink Model
Classes
biolink:AbstractEntity
biolink:Attribute
biolink:BiologicalSex
biolink:ClinicalCourse
biolink:ClinicalModifier
biolink:FrequencyValue
biolink:GenotypicSex
biolink:Inheritance
biolink:Onset
biolink:PhenotypicSex
biolink:QuantityValue
biolink:SeverityValue
biolink:Zygosity
Entities
Associations
Mixins
biolink:EntityToDiseaseAssociation
biolink:EntityToFeatureOrDiseaseQualifiers
biolink:FrequencyQualifierMixin
biolink:FrequencyQuantifier
biolink:GeneGrouping
biolink:ModelToDiseaseMixin
biolink:PathognomonicityQuantifier
biolink:RelationshipQuantifier
biolink:SensitivityQuantifier
biolink:SpecificityQuantifier
biolink:SubjectOfInvestigation
biolink:ThingWithTaxon
Relations
biolink:actively_involved_in
biolink:affects
biolink:affects_abundance_of
biolink:affects_activity_of
biolink:affects_degradation_of
biolink:affects_expression_in
biolink:affects_expression_of
biolink:affects_folding_of
biolink:affects_localization_of
biolink:affects_metabolic_processing_of
biolink:affects_molecular_modification_of
biolink:affects_mutation_rate_of
biolink:affects_response_to
biolink:affects_risk_for
biolink:affects_secretion_of
biolink:affects_splicing_of
biolink:affects_stability_of
biolink:affects_synthesis_of
biolink:affects_transport_of
biolink:affects_uptake_of
biolink:biomarker_for
biolink:capable_of
biolink:caused_by
biolink:causes
biolink:causes_adverse_event
biolink:chemically_similar_to
biolink:close_match
biolink:coexists_with
biolink:colocalizes_with
biolink:contraindicated_for
biolink:contributes_to
biolink:correlated_with
biolink:decreases_abundance_of
biolink:decreases_activity_of
biolink:decreases_degradation_of
biolink:decreases_expression_of
biolink:decreases_folding_of
biolink:decreases_localization_of
biolink:decreases_metabolic_processing_of
biolink:decreases_molecular_interaction
biolink:decreases_molecular_modification_of
biolink:decreases_mutation_rate_of
biolink:decreases_response_to
biolink:decreases_secretion_of
biolink:decreases_splicing_of
biolink:decreases_stability_of
biolink:decreases_synthesis_of
biolink:decreases_transport_of
biolink:decreases_uptake_of
biolink:derives_from
biolink:derives_into
biolink:develops_from
biolink:directly_interacts_with
biolink:disease_has_basis_in
biolink:disrupts
biolink:enabled_by
biolink:enables
biolink:exact_match
biolink:expressed_in
biolink:expresses
biolink:gene_associated_with_condition
biolink:genetically_interacts_with
biolink:has_biomarker
biolink:has_completed
biolink:has_decreased_amount
biolink:has_gene_product
biolink:has_increased_amount
biolink:has_input
biolink:has_molecular_consequence
biolink:has_not_completed
biolink:has_output
biolink:has_part
biolink:has_participant
biolink:has_phenotype
biolink:has_sequence_location
biolink:has_variant_part
biolink:homologous_to
biolink:in_cell_population_with
biolink:in_complex_with
biolink:in_linkage_disequilibrium_with
biolink:in_pathway_with
biolink:in_taxon
biolink:increases_abundance_of
biolink:increases_activity_of
biolink:increases_degradation_of
biolink:increases_expression_of
biolink:increases_folding_of
biolink:increases_localization_of
biolink:increases_metabolic_processing_of
biolink:increases_molecular_interaction
biolink:increases_molecular_modification_of
biolink:increases_mutation_rate_of
biolink:increases_response_to
biolink:increases_secretion_of
biolink:increases_splicing_of
biolink:increases_stability_of
biolink:increases_synthesis_of
biolink:increases_transport_of
biolink:increases_uptake_of
biolink:interacts_with
biolink:is_missense_variant_of
biolink:is_nearby_variant_of
biolink:is_non_coding_variant_of
biolink:is_nonsense_variant_of
biolink:is_splice_site_variant_of
biolink:is_synonymous_variant_of
biolink:lacks_part
biolink:located_in
biolink:location_of
biolink:manifestation_of
biolink:model_of
biolink:molecular_activity_enabled_by
biolink:molecular_activity_has_input
biolink:molecular_activity_has_output
biolink:molecularly_interacts_with
biolink:negatively_regulates
biolink:negatively_regulates_entity_to_entity
biolink:negatively_regulates_process_to_process
biolink:occurs_in
biolink:orthologous_to
biolink:overlaps
biolink:paralogous_to
biolink:part_of
biolink:participates_in
biolink:physically_interacts_with
biolink:positively_regulates
biolink:positively_regulates_entity_to_entity
biolink:positively_regulates_process_to_process
biolink:precedes
biolink:predisposes
biolink:prevents
biolink:produced_by
biolink:produces
biolink:regulates
biolink:regulates_entity_to_entity
biolink:regulates_process_to_process
biolink:related_condition
biolink:related_to
biolink:same_as
biolink:similar_to
biolink:subclass_of
biolink:superclass_of
biolink:treated_by
biolink:treatment_has_part
biolink:treats
biolink:xenologous_to
Slots
biolink:has_attribute
biolink:has_attribute_type
biolink:has_numeric_value
biolink:has_qualitative_value
biolink:has_quantitative_value
biolink:has_unit
biolink:interacting_molecules_category
biolink:pairwise_interaction_association_interacting_molecules_category
Node Properties
Edge Properties
Types
biolink:BiologicalSequence
https://w3id.org/biolink/vocab/biolinkml:types/Boolean
biolink:CategoryType
biolink:ChemicalFormulaValue
https://w3id.org/biolink/vocab/biolinkml:types/Date
https://w3id.org/biolink/vocab/biolinkml:types/Datetime
https://w3id.org/biolink/vocab/biolinkml:types/Double
biolink:EdgeLabelType
https://w3id.org/biolink/vocab/biolinkml:types/Float
biolink:Frequency
https://w3id.org/biolink/vocab/biolinkml:types/Integer
biolink:IriType
biolink:LabelType
biolink:NarrativeText
https://w3id.org/biolink/vocab/biolinkml:types/Ncname
https://w3id.org/biolink/vocab/biolinkml:types/Nodeidentifier
https://w3id.org/biolink/vocab/biolinkml:types/Objectidentifier
biolink:PercentageFrequencyValue
biolink:Quotient
https://w3id.org/biolink/vocab/biolinkml:types/String
biolink:SymbolType
https://w3id.org/biolink/vocab/biolinkml:types/Time
biolink:TimeType
biolink:Unit
https://w3id.org/biolink/vocab/biolinkml:types/Uri
https://w3id.org/biolink/vocab/biolinkml:types/Uriorcurie
Search
Biolink Model on GitHub
Browse Biolink Model
Mixins
biolink:RelationshipQuantifier
Class: RelationshipQuantifier
URI:
biolink:RelationshipQuantifier
Children
FrequencyQuantifier
SensitivityQuantifier
SpecificityQuantifier
Referenced by class
Attributes