Link

Type: ProteinIsoform

Represents a protein that is a specific isoform of the canonical or reference protein. See https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4114032/

URI: biolink:ProteinIsoform


![img](http://yuml.me/diagram/nofunky;dir:TB/class/[ProteinIsoform name(i):symbol_type;has_biological_sequence(i):biological_sequence%20%3F;id(i):string;category(i):category_type%20%2B]uses%20-.-%3E[GeneProductIsoform],[Protein]%5E-[ProteinIsoform],[Protein],[OrganismTaxon],[GeneProductIsoform])

Identifier prefixes

  • UniProtKB
  • PR
  • ENSEMBL

Parents

  • is_a: Protein - A gene product that is composed of a chain of amino acid sequences and is produced by ribosome-mediated translation of mRNA

Uses Mixins

  • mixin: GeneProductIsoform - This is an abstract class that can be mixed in with different kinds of gene products to indicate that the gene product is intended to represent a specific isoform rather than a canonical or reference or generic product. The designation of canonical or reference may be arbitrary, or it may represent the superclass of all isoforms.

Attributes

Inherited from genomic entity:

Inherited from macromolecular machine:

Inherited from named thing:

  • id REQ
    • Description: A unique identifier for a thing. Must be either a CURIE shorthand for a URI or a complete URI
    • range: String
    • in subsets: (translator_minimal)
  • name REQ
    • Description: A human-readable name for a thing
    • range: LabelType
    • in subsets: (translator_minimal)
  • category 1..*
    • Description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the biolink entity type class. In a neo4j database this MAY correspond to the neo4j label tag
    • range: CategoryType
    • in subsets: (translator_minimal)

Inherited from thing with taxon:

  • in taxon 0..*
    • Description: connects a thing to a class representing a taxon
    • range: OrganismTaxon
    • in subsets: (translator_minimal)

Other properties

     
Aliases:   proteoform