Link

Type: Genotype

An information content entity that describes a genome by specifying the total variation in genomic sequence and/or gene expression, relative to some extablished background

URI: biolink:Genotype

GENO:0000536

SIO:001079


![img](http://yuml.me/diagram/nofunky;dir:TB/class/[Zygosity],[OrganismTaxon],[GenotypeToVariantAssociation],[GenotypeToThingAssociation],[GenotypeToPhenotypicFeatureAssociation],[GenotypeToGenotypePartAssociation],[GenotypeToGeneAssociation],[GenotypeAsAModelOfDiseaseAssociation],[Zygosity]%3Chas%20zygosity%200..1-%20[Genotype has_biological_sequence(i):biological_sequence%20%3F;id(i):string;name(i):label_type;category(i):category_type%20%2B],[GenotypeAsAModelOfDiseaseAssociation]-%20subject%201..1%3E[Genotype],[GenotypeToGeneAssociation]-%20subject%201..1%3E[Genotype],[GenotypeToGenotypePartAssociation]-%20object%201..1%3E[Genotype],[GenotypeToGenotypePartAssociation]-%20subject%201..1%3E[Genotype],[GenotypeToPhenotypicFeatureAssociation]-%20subject%201..1%3E[Genotype],[GenotypeToThingAssociation]-%20subject%201..1%3E[Genotype],[GenotypeToVariantAssociation]-%20subject%201..1%3E[Genotype],[GenomicEntity]%5E-[Genotype],[GenomicEntity])

Parents

  • is_a: GenomicEntity - an entity that can either be directly located on a genome (gene, transcript, exon, regulatory region) or is encoded in a genome (protein)

Referenced by class

Attributes

Own

Inherited from genomic entity:

Inherited from named thing:

  • id REQ
    • Description: A unique identifier for a thing. Must be either a CURIE shorthand for a URI or a complete URI
    • range: String
    • in subsets: (translator_minimal)
  • name REQ
    • Description: A human-readable name for a thing
    • range: LabelType
    • in subsets: (translator_minimal)
  • category 1..*
    • Description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the biolink entity type class. In a neo4j database this MAY correspond to the neo4j label tag
    • range: CategoryType
    • in subsets: (translator_minimal)

Inherited from thing with taxon:

  • in taxon 0..*
    • Description: connects a thing to a class representing a taxon
    • range: OrganismTaxon
    • in subsets: (translator_minimal)

Other properties

     
Mappings:   GENO:0000536
    SIO:001079
Comments:   Consider renaming as genotypic entity