Class: disease or phenotypic feature

Either one of a disease or an individual phenotypic feature. Some knowledge resources such as Monarch treat these as distinct, others such as MESH conflate.

URI: biolink:DiseaseOrPhenotypicFeature

Inheritance

• is_a: BiologicalEntity
• mixin: ThingWithTaxon - A mixin that can be used on any entity with a taxon

  Children

• Disease
• PhenotypicFeature

  Used by

• MolecularEntity biomarker for _0..* DiseaseOrPhenotypicFeature
• CellLineToDiseaseOrPhenotypicFeatureAssociation cell line to disease or phenotypic feature association.subject _REQ DiseaseOrPhenotypicFeature
• ChemicalToDiseaseOrPhenotypicFeatureAssociation chemical to disease or phenotypic feature association.object _REQ DiseaseOrPhenotypicFeature
• DiseaseOrPhenotypicFeatureAssociationToThingAssociation disease or phenotypic feature association to thing association.subject _REQ DiseaseOrPhenotypicFeature
• Gene gene associated with condition _0..* DiseaseOrPhenotypicFeature
• ThingToDiseaseOrPhenotypicFeatureAssociation thing to disease or phenotypic feature association.object _REQ DiseaseOrPhenotypicFeature
• Treatment treats _1..* DiseaseOrPhenotypicFeature

  Fields

• category _0..*
  • Description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the biolink entity type class. In a neo4j database this MAY correspond to the neo4j label tag
  • range: IriType
  • inherited from: NamedThing
  • in subsets: (translator_minimal)
• correlated with _0..*
  • Description: holds between a disease or phenotypic feature and a measurable molecular entity that is used as an indicator of the presence or state of the disease or feature.
  • range: MolecularEntity
  • in subsets: (translator_minimal)
• description _OPT
  • Description: a human-readable description of a thing
  • range: NarrativeText
  • inherited from: NamedThing
  • in subsets: (translator_minimal)
• full name _OPT
  • Description: a long-form human readable name for a thing
  • range: LabelType
  • inherited from: NamedThing
• has biomarker _0..*
  • Description: holds between a disease or phenotypic feature and a measurable molecular entity that is used as an indicator of the presence or state of the disease or feature.
  • range: MolecularEntity
  • in subsets: (translator_minimal)
• has phenotype _0..*
  • Description: holds between a biological entity and a phenotype, where a phenotype is construed broadly as any kind of quality of an organism part, a collection of these qualities, or a change in quality or qualities (e.g. abnormally increased temperature).
  • range: PhenotypicFeature
  • inherited from: BiologicalEntity
  • in subsets: (translator_minimal)
• id _REQ
  • Description: A unique identifier for a thing. Must be either a CURIE shorthand for a URI or a complete URI
  • range: IdentifierType
  • inherited from: NamedThing
  • in subsets: (translator_minimal)
• in taxon _0..*
  • Description: connects a thing to a class representing a taxon
  • range: OrganismTaxon
  • in subsets: (translator_minimal)
• interacts with _0..*
  • Description: holds between any two entities that directly or indirectly interact with each other
  • range: NamedThing
  • inherited from: NamedThing
  • in subsets: (translator_minimal)
• iri _OPT
  • Description: An IRI for the node. This is determined by the id using expansion rules.
  • range: IriType
  • inherited from: NamedThing
  • in subsets: (translator_minimal)
• name _OPT
  • Description: A human-readable name for a thing
  • range: LabelType
  • inherited from: NamedThing
  • in subsets: (translator_minimal)
• node property _OPT
  • Description: A grouping for any property that holds between a node and a value
  • range: String
  • inherited from: NamedThing
• related to _0..*
  • Description: A relationship that is asserted between two named things
  • range: NamedThing
  • inherited from: NamedThing
• synonym _0..*
  • Description: Alternate human-readable names for a thing
  • range: LabelType
  • inherited from: NamedThing
  • in subsets: (translator_minimal)
• systematic synonym _OPT
  • Description: more commonly used for gene symbols in yeast
  • range: LabelType
  • inherited from: NamedThing
• treated by _0..*
  • Description: holds between a disease or phenotypic feature and a therapeutic process or chemical substance that is used to treat the condition
  • range: NamedThing
  • in subsets: (translator_minimal)