Class: anatomical entity

A subcellular location, cell type or gross anatomical part

URI: biolink:AnatomicalEntity

Parents

• is_a: OrganismalEntity - A named entity that is either a part of an organism, a whole organism, population or clade of organisms, excluding molecular entities

Uses Mixins

• mixin: ThingWithTaxon - A mixin that can be used on any entity with a taxon

Children

• Cell
• CellularComponent - A location in or around a cell
• GrossAnatomicalStructure

Referenced by class

• AnatomicalEntityToAnatomicalEntityAssociation object _REQ AnatomicalEntity
• AnatomicalEntityToAnatomicalEntityAssociation subject _REQ AnatomicalEntity
• AnatomicalEntityToAnatomicalEntityOntogenicAssociation object _REQ AnatomicalEntity
• AnatomicalEntityToAnatomicalEntityOntogenicAssociation subject _REQ AnatomicalEntity
• AnatomicalEntityToAnatomicalEntityPartOfAssociation object _REQ AnatomicalEntity
• AnatomicalEntityToAnatomicalEntityPartOfAssociation subject _REQ AnatomicalEntity
• DiseaseOrPhenotypicFeatureAssociationToLocationAssociation object _REQ AnatomicalEntity
• GeneOrGeneProduct expressed in _0..* AnatomicalEntity
• GeneToExpressionSiteAssociation object _REQ AnatomicalEntity

Attributes

Inherited from named thing:

• id _REQ
  • Description: A unique identifier for a thing. Must be either a CURIE shorthand for a URI or a complete URI
  • range: IdentifierType
  • inherited from: NamedThing
  • in subsets: (translator_minimal)
• name _REQ
  • Description: A human-readable name for a thing
  • range: LabelType
  • inherited from: NamedThing
  • in subsets: (translator_minimal)
• category _1..*
  • Description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the biolink entity type class. In a neo4j database this MAY correspond to the neo4j label tag
  • range: IriType
  • inherited from: NamedThing
  • in subsets: (translator_minimal)

Inherited from thing with taxon:

• in taxon _0..*
  • Description: connects a thing to a class representing a taxon
  • range: OrganismTaxon
  • in subsets: (translator_minimal)

Domain for slot:

• expresses _0..*
  • Description: holds between an anatomical entity and gene or gene product that is expressed there
  • range: GeneOrGeneProduct
  • in subsets: (translator_minimal)