Class: GeneToEntityAssociationMixin
classDiagram
class GeneToEntityAssociationMixin
GeneToEntityAssociationMixin <|-- GeneToPathwayAssociation
GeneToEntityAssociationMixin <|-- GeneToDiseaseOrPhenotypicFeatureAssociation
GeneToEntityAssociationMixin <|-- GeneToPhenotypicFeatureAssociation
GeneToEntityAssociationMixin <|-- GeneToDiseaseAssociation
GeneToEntityAssociationMixin <|-- CausalGeneToDiseaseAssociation
GeneToEntityAssociationMixin <|-- CorrelatedGeneToDiseaseAssociation
GeneToEntityAssociationMixin <|-- DruggableGeneToDiseaseAssociation
GeneToEntityAssociationMixin : object
GeneToEntityAssociationMixin --|> NamedThing : object
GeneToEntityAssociationMixin : predicate
GeneToEntityAssociationMixin : subject
GeneToEntityAssociationMixin --|> GeneOrGeneProduct : subject
Slots
Name | Cardinality and Range | Inheritance | Examples |
---|---|---|---|
subject: gene that is the subject of the association |
1 GeneOrGeneProduct |
direct | |
predicate: A high-level grouping for the relationship type. AKA minimal predicate. This is analogous to category for nodes. |
1 PredicateType |
direct | |
object: connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object. |
1 NamedThing |
direct |
Mixin Usage
mixed into | description |
---|---|
GeneToPathwayAssociation | An interaction between a gene or gene product and a biological process or pathway. |
GeneToDiseaseOrPhenotypicFeatureAssociation | None |
GeneToPhenotypicFeatureAssociation | None |
GeneToDiseaseAssociation | None |
CausalGeneToDiseaseAssociation | None |
CorrelatedGeneToDiseaseAssociation | None |
DruggableGeneToDiseaseAssociation | None |
LinkML Source
name: gene to entity association mixin
from_schema: https://w3id.org/biolink/biolink-model
mixin: true
slots:
- subject
- predicate
- object
slot_usage:
subject:
name: subject
description: gene that is the subject of the association
range: gene or gene product
defining_slots:
- subject