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Class: GeneGroupingMixin

Description: any grouping of multiple genes or gene products
classDiagram class GeneGroupingMixin GeneGroupingMixin <|-- ProteinDomain GeneGroupingMixin <|-- ProteinFamily GeneGroupingMixin <|-- GeneFamily GeneGroupingMixin <|-- GenomicBackgroundExposure GeneGroupingMixin <|-- DrugToGeneInteractionExposure GeneGroupingMixin : has_gene_or_gene_product GeneGroupingMixin --|> Gene : has_gene_or_gene_product

Slots

Name Cardinality and Range Inheritance Examples
has_gene_or_gene_product:
connects an entity with one or more gene or gene products
*
Gene		 direct

Mixin Usage

mixed into description
ProteinDomain A conserved part of protein sequence and (tertiary) structure that can evolve, function, and exist independently of the rest of the protein chain. Protein domains maintain their structure and function independently of the proteins in which they are found. e.g. an SH3 domain.
ProteinFamily None
GeneFamily any grouping of multiple genes or gene products related by common descent
GenomicBackgroundExposure A genomic background exposure is where an individual's specific genomic background of genes, sequence variants or other pre-existing genomic conditions constitute a kind of 'exposure' to the organism, leading to or influencing an outcome.
DrugToGeneInteractionExposure drug to gene interaction exposure is a drug exposure is where the interactions of the drug with specific genes are known to constitute an 'exposure' to the organism, leading to or influencing an outcome.

LinkML Source

name: gene grouping mixin
description: any grouping of multiple genes or gene products
from_schema: https://w3id.org/biolink/biolink-model
mixin: true
slots:
- has gene or gene product