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Class: EntityToDiseaseOrPhenotypicFeatureAssociationMixin

classDiagram class EntityToDiseaseOrPhenotypicFeatureAssociationMixin EntityToDiseaseOrPhenotypicFeatureAssociationMixin <|-- CellLineToDiseaseOrPhenotypicFeatureAssociation EntityToDiseaseOrPhenotypicFeatureAssociationMixin <|-- ChemicalToDiseaseOrPhenotypicFeatureAssociation EntityToDiseaseOrPhenotypicFeatureAssociationMixin <|-- ChemicalOrDrugOrTreatmentToDiseaseOrPhenotypicFeatureAssociation EntityToDiseaseOrPhenotypicFeatureAssociationMixin <|-- ChemicalOrDrugOrTreatmentSideEffectDiseaseOrPhenotypicFeatureAssociation EntityToDiseaseOrPhenotypicFeatureAssociationMixin <|-- MaterialSampleToDiseaseOrPhenotypicFeatureAssociation EntityToDiseaseOrPhenotypicFeatureAssociationMixin : object EntityToDiseaseOrPhenotypicFeatureAssociationMixin --|> DiseaseOrPhenotypicFeature : object EntityToDiseaseOrPhenotypicFeatureAssociationMixin : predicate EntityToDiseaseOrPhenotypicFeatureAssociationMixin : subject EntityToDiseaseOrPhenotypicFeatureAssociationMixin --|> NamedThing : subject

Slots

Name Cardinality and Range Inheritance Examples
subject:
connects an association to the subject of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object. 		1
NamedThing		 direct
predicate:
A high-level grouping for the relationship type. AKA minimal predicate. This is analogous to category for nodes. 		1
PredicateType		 direct
object:
disease or phenotype 		1
DiseaseOrPhenotypicFeature		 direct MONDO:0017314, MP:0013229

Mixin Usage

mixed into description
CellLineToDiseaseOrPhenotypicFeatureAssociation An relationship between a cell line and a disease or a phenotype, where the cell line is derived from an individual with that disease or phenotype.
ChemicalToDiseaseOrPhenotypicFeatureAssociation An interaction between a chemical entity and a phenotype or disease, where the presence of the chemical gives rise to or exacerbates the phenotype.
ChemicalOrDrugOrTreatmentToDiseaseOrPhenotypicFeatureAssociation This association defines a relationship between a chemical or treatment (or procedure) and a disease or phenotypic feature where the disease or phenotypic feature is a secondary undesirable effect.
ChemicalOrDrugOrTreatmentSideEffectDiseaseOrPhenotypicFeatureAssociation This association defines a relationship between a chemical or treatment (or procedure) and a disease or phenotypic feature where the disesae or phenotypic feature is a secondary, typically (but not always) undesirable effect.
MaterialSampleToDiseaseOrPhenotypicFeatureAssociation An association between a material sample and a disease or phenotype.

LinkML Source

name: entity to disease or phenotypic feature association mixin
from_schema: https://w3id.org/biolink/biolink-model
mixin: true
slots:
- subject
- predicate
- object
slot_usage:
  object:
    name: object
    description: disease or phenotype
    examples:
    - value: MONDO:0017314
      description: Ehlers-Danlos syndrome, vascular type
    - value: MP:0013229
      description: abnormal brain ventricle size
    range: disease or phenotypic feature
defining_slots:
- object