Class: ClinicalCourse
Description: The course a disease typically takes from its onset, progression in time, and eventual resolution or death of the affected individual
classDiagram
class ClinicalCourse
ClinicalAttribute <|-- ClinicalCourse
ClinicalCourse <|-- Onset
ClinicalCourse : category
ClinicalCourse : deprecated
ClinicalCourse : description
ClinicalCourse : full_name
ClinicalCourse : has_attribute
ClinicalCourse --|> Attribute : has_attribute
ClinicalCourse : has_attribute_type
ClinicalCourse --|> OntologyClass : has_attribute_type
ClinicalCourse : has_qualitative_value
ClinicalCourse --|> NamedThing : has_qualitative_value
ClinicalCourse : has_quantitative_value
ClinicalCourse --|> QuantityValue : has_quantitative_value
ClinicalCourse : id
ClinicalCourse : iri
ClinicalCourse : name
ClinicalCourse : provided_by
ClinicalCourse : synonym
ClinicalCourse : type
ClinicalCourse : xref
Inheritance
- Entity
- NamedThing
- Attribute [ OntologyClass]
- ClinicalAttribute
- ClinicalCourse
- ClinicalAttribute
- Attribute [ OntologyClass]
- NamedThing
Slots
Name | Cardinality and Range | Inheritance | Examples |
---|---|---|---|
name: The human-readable 'attribute name' can be set to a string which reflects its context of interpretation, e.g. SEPIO evidence/provenance/confidence annotation or it can default to the name associated with the 'has attribute type' slot ontology term. |
0..1 LabelType |
Attribute, Entity | |
has_attribute_type: connects an attribute to a class that describes it |
1 OntologyClass |
Attribute | |
has_quantitative_value: connects an attribute to a value |
* QuantityValue |
Attribute | |
has_qualitative_value: connects an attribute to a value |
0..1 NamedThing |
Attribute | |
iri: An IRI for an entity. This is determined by the id using expansion rules. |
0..1 IriType |
Attribute, Entity | |
id: A unique identifier for an entity. Must be either a CURIE shorthand for a URI or a complete URI |
1 String |
OntologyClass, Entity | |
provided_by: The value in this node property represents the knowledge provider that created or assembled the node and all of its attributes. Used internally to represent how a particular node made its way into a knowledge provider or graph. |
* String |
NamedThing | |
xref: A database cross reference or alternative identifier for a NamedThing or edge between two NamedThings. This property should point to a database record or webpage that supports the existence of the edge, or gives more detail about the edge. This property can be used on a node or edge to provide multiple URIs or CURIE cross references. |
* Uriorcurie |
NamedThing | |
full_name: a long-form human readable name for a thing |
0..1 LabelType |
NamedThing | |
synonym: Alternate human-readable names for a thing |
* LabelType |
NamedThing | |
category: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the biolink entity type class. In a neo4j database this MAY correspond to the neo4j label tag. In an RDF database it should be a biolink model class URI. This field is multi-valued. It should include values for ancestors of the biolink class; for example, a protein such as Shh would have category values biolink:Protein , biolink:GeneProduct , biolink:MolecularEntity . In an RDF database, nodes will typically have an rdf:type triples. This can be to the most specific biolink class, or potentially to a class more specific than something in biolink. For example, a sequence feature f may have a rdf:type assertion to a SO class such as TF_binding_site, which is more specific than anything in biolink. Here we would have categories {biolink:GenomicEntity, biolink:MolecularEntity, biolink:NamedThing} |
1..* Uriorcurie |
Entity | |
type: None |
* String |
Entity | |
description: a human-readable description of an entity |
0..1 NarrativeText |
Entity | |
has_attribute: connects any entity to an attribute |
* Attribute |
Entity | |
deprecated: A boolean flag indicating that an entity is no longer considered current or valid. |
0..1 Boolean |
Entity |
LinkML Source
name: clinical course
description: The course a disease typically takes from its onset, progression in time,
and eventual resolution or death of the affected individual
from_schema: https://w3id.org/biolink/biolink-model
exact_mappings:
- HP:0031797
is_a: clinical attribute