Class: CaseToEntityAssociationMixin
Description: An abstract association for use where the case is the subject
classDiagram
class CaseToEntityAssociationMixin
CaseToEntityAssociationMixin <|-- CaseToPhenotypicFeatureAssociation
CaseToEntityAssociationMixin <|-- CaseToDiseaseAssociation
CaseToEntityAssociationMixin <|-- CaseToVariantAssociation
CaseToEntityAssociationMixin <|-- CaseToGeneAssociation
CaseToEntityAssociationMixin : object
CaseToEntityAssociationMixin --|> NamedThing : object
CaseToEntityAssociationMixin : predicate
CaseToEntityAssociationMixin : subject
CaseToEntityAssociationMixin --|> Case : subject
Slots
| Name | Cardinality and Range | Inheritance | Examples |
|---|---|---|---|
| subject: the case (e.g. patient) that has the property |
1 Case |
direct | |
| predicate: A high-level grouping for the relationship type. AKA minimal predicate. This is analogous to category for nodes. |
1 PredicateType |
direct | |
| object: connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object. |
1 NamedThing |
direct |
Mixin Usage
| mixed into | description |
|---|---|
| CaseToPhenotypicFeatureAssociation | An association between a case (e.g. individual patient) and a phenotypic feature in which the individual has or has had the phenotype. |
| CaseToDiseaseAssociation | An association between a Case (patient) and a Disease |
| CaseToVariantAssociation | Association between a Case and a Genetic Variant |
| CaseToGeneAssociation | Association between a Case and a Gene (e.g., indicating a gene of interest for the case) |
LinkML Source
name: case to entity association mixin
description: An abstract association for use where the case is the subject
from_schema: https://w3id.org/biolink/biolink-model
mixin: true
slots:
- subject
- predicate
- object
slot_usage:
subject:
name: subject
description: the case (e.g. patient) that has the property
range: case
defining_slots:
- subject