Skip to content

Class: CaseToEntityAssociationMixin

Description: An abstract association for use where the case is the subject
classDiagram class CaseToEntityAssociationMixin CaseToEntityAssociationMixin <|-- CaseToPhenotypicFeatureAssociation CaseToEntityAssociationMixin <|-- CaseToDiseaseAssociation CaseToEntityAssociationMixin <|-- CaseToVariantAssociation CaseToEntityAssociationMixin <|-- CaseToGeneAssociation CaseToEntityAssociationMixin : object CaseToEntityAssociationMixin --|> NamedThing : object CaseToEntityAssociationMixin : predicate CaseToEntityAssociationMixin : subject CaseToEntityAssociationMixin --|> Case : subject

Slots

Name Cardinality and Range Inheritance Examples
subject:
the case (e.g. patient) that has the property
1
Case		 direct
predicate:
A high-level grouping for the relationship type. AKA minimal predicate. This is analogous to category for nodes. 		1
PredicateType		 direct
object:
connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object. 		1
NamedThing		 direct

Mixin Usage

mixed into description
CaseToPhenotypicFeatureAssociation An association between a case (e.g. individual patient) and a phenotypic feature in which the individual has or has had the phenotype.
CaseToDiseaseAssociation An association between a Case (patient) and a Disease
CaseToVariantAssociation Association between a Case and a Genetic Variant
CaseToGeneAssociation Association between a Case and a Gene (e.g., indicating a gene of interest for the case)

LinkML Source

name: case to entity association mixin
description: An abstract association for use where the case is the subject
from_schema: https://w3id.org/biolink/biolink-model
mixin: true
slots:
- subject
- predicate
- object
slot_usage:
  subject:
    name: subject
    description: the case (e.g. patient) that has the property
    range: case
defining_slots:
- subject